Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele15g1715 ATGGAAATGCACATTATGGATTCAGACTGGGAGACTTTCAGTGAGAGCAGCAGCAGCAGCGAGGATCAAGAGGAAATTGATTTTCTATATGCTGGGCAAGCTCGGAGCATACTATCCTGTTTAGACGAAAGCATTGGGAAAATTGATGATTTCCTCTCATTTGAAAGAGCATTTGTTCATGGGGATGTCGTTTGCTCCTTGTCAGACCCATCTGGACAGATGGGCAGGGTTACAGGTGTTGATGTGTTTGTGGATTTGGAAAGTGTTCATGGAAAATTGTTAAAAAATGTAAACTCTAAGAGGCTTTTGAAAATTCGCTCCATTTCAGAAGGTGATTATGTGATTAAGGGGCCATGGCTTGGAAGAGTTCAAAAGGTGGTGGACAAAGTAACTGTATTATTTGATGATGGAACTAAATGTGAGGTCACCGCATTGGAAAGAGATAAGATCTTGCCTCTGACTCGTAATTTGCTTGAAGACTTACAGTATCCATACTATCCAGGGCAGAGAGTAAGGCTCAATTCCTCAACTTCTTCTAAGTCAGCTAGATGGTTATGTGGAACTTGGAGAGACAGTCAAGATGAAGGAACCGTTTGTTCTGTTGAAGCAGGGCTAGTGAATGTTAACTGGCTCGTGTTTGTTCCCATGGGTCCTGATTTTACTGGAAGTGCTCCCCCATGTTGGCAAGATTCCAAAAATTTGACCTTGCTCTCATGTTTTTCACATGCAAACTGGCAGCTTGGTGACTGGTGCATGCTTGCAGTGGCAGACCAAAAGGAACAGAATTTTGGTAACACATCTACTGGGGTTCTTACTAAGGAGCATATTATGGCACGAGGATATAAAAATGGAAACGTTAACTTCAATATTGGGGAACTTTTTGTAATTGTGAAAATAAGGACCAAAGTTGATATTGTATGGCAGGATGGTGAAAACACTTTGGGATTAGATCCCCATACTCTACTCCCAGTGAATGTCATTGACACTCACGAATTTTGGCCCCAGCAGTTTGTGTTGGAAAAAGGTGCTTCTGATGATCACCCTAAGGCCAGCTCTCAAAGATGGGGAGTTGTCCAATTCGTGGATGCAAAAGAGCGTACTATAAAGGTACAATGGGATACTGTTTCCATATCCATGCCAGAGAATTTGGCTGGAGATAAAATGGAGGAAACTGTGAGTGCCTATGAACTCATAGAGCACCCAGACTACTCCTATTGTTTTGGTGATATTGTTTTCAAGGCGGCTCAAAAACAGCTTGGTTACCAAGCTGAAAAAGATCAAGCAAAGTCAGCAACTGACTTGAATGCGGAGTCTGCTCTTATAGACAGGAACCACATCAGTTATCAGGATGAGTTCCCTGATAACTGTTACCTGTCATGTATTGGCAACGTTATTGGTTTCAAAGATGGTGCTGTAGAGGTGAAATGGGCTACCGGTTTAACAACCAAGGTTGCGCCTCATGAAATTCTTCGAATTGATAAGCATGAAGGTTCAACTGAAACCCCTGTTCCATATGAAGCAGATATTGAGGAGTTGACTCAAGACATGACTCAGAATGGAAACCTTACTTCTGACAAAAAGGGAAAGGGCTTGTTAGATTTTGATGATGATAGAGTGAATTGTGAAAGGCCTCCAGGGGAATGTAGCACCTTTTCCCTTCCTCGAGCCGCCATTGAAATTTTCTATAGCATTAAGGCCAGCATTTTTCAAACATTTGGTGTAACATCACTTTCACGAGCAATTTCTTTGGTCCCTACAACTGAAGATGGAAATCAATCTGAAAATCTTAATAAGAAAGAAGTTTCAGAAACTTGTGAACTCTGCACTGAAGCAAATCCAAGGACTGAATTGCAGTTTACTGAAGGCATAACTCCAGATCAGGATGTTATTAGATTTTCTGAGAGGAAAGATCTTCCATTTTCTTCAAATAGCAACAATTCAGATTGGTTTAAGCAGTTTGATATTATAGATAATTGCTCAGACCACCACTTCTTTGATGAGCAAAAAGGGTTGGCATTATCTCAGGTAAAAAGAGGATGGGTGAAAAGGATTCAGCAAGAATGGAGCATCCTAGAGAGAAATCTTCCAGAAACTATTTATGTCCGTGTGTTCGAAGAAAGAATGGATCTCCTGCGAGCAGCTATTGTCGGTGCACCTGGAACCCCTTATCATGATGGCTTATTCTTCTTTGATGTTTGTTTCCCTCCAGAGTATCCTAGTGAACCACCTATGGTGCACTACAATTCGGGTGGGCTCAGATTAAACCCTAATTTGTACGAATCGGGAAAAGTCTGTCTGAGCCTCCTGAACACGTGGACCGGTACAGGCAGTGAAATGTGGAACCCAGGGGCCTCCACCATTCTTCAAGTCCTTCTCTCTCTGCAGGCCCTCGTCCTTAATGAAAAGCCTTATTTCAACGAGGCTGGATATGACCAGCAGATTGGCCAAGCTGAAGGAGAGAAGAACTCGGTGAGCTACAATGAAAATGCGTTCCTTGTCACCTGCAAATCAATGCTATATCTACAGAGAAAGCCACCCAAGCATTTTGAGTCACTCGTGGAAGAGCACTTCAACCAACGCGCACAACACATACTTCTCGCTTGCAAGGCGTATAGCGAAGGAGCTCCCATTGGATGTGCTTTTGAATGTGGAAAAACCATGAACCAAAAAGATCAGAAGGGAACTTCCACAGGTTTTAAAATCATGCTTGCTAAGCTCTTCCCCAAGCTCGTCGAGGCTTTTTCCGATAAAGGAACCGATTGCAGCCAGTTTATTTAG 2778 0.4258 MEMHIMDSDWETFSESSSSSEDQEEIDFLYAGQARSILSCLDESIGKIDDFLSFERAFVHGDVVCSLSDPSGQMGRVTGVDVFVDLESVHGKLLKNVNSKRLLKIRSISEGDYVIKGPWLGRVQKVVDKVTVLFDDGTKCEVTALERDKILPLTRNLLEDLQYPYYPGQRVRLNSSTSSKSARWLCGTWRDSQDEGTVCSVEAGLVNVNWLVFVPMGPDFTGSAPPCWQDSKNLTLLSCFSHANWQLGDWCMLAVADQKEQNFGNTSTGVLTKEHIMARGYKNGNVNFNIGELFVIVKIRTKVDIVWQDGENTLGLDPHTLLPVNVIDTHEFWPQQFVLEKGASDDHPKASSQRWGVVQFVDAKERTIKVQWDTVSISMPENLAGDKMEETVSAYELIEHPDYSYCFGDIVFKAAQKQLGYQAEKDQAKSATDLNAESALIDRNHISYQDEFPDNCYLSCIGNVIGFKDGAVEVKWATGLTTKVAPHEILRIDKHEGSTETPVPYEADIEELTQDMTQNGNLTSDKKGKGLLDFDDDRVNCERPPGECSTFSLPRAAIEIFYSIKASIFQTFGVTSLSRAISLVPTTEDGNQSENLNKKEVSETCELCTEANPRTELQFTEGITPDQDVIRFSERKDLPFSSNSNNSDWFKQFDIIDNCSDHHFFDEQKGLALSQVKRGWVKRIQQEWSILERNLPETIYVRVFEERMDLLRAAIVGAPGTPYHDGLFFFDVCFPPEYPSEPPMVHYNSGGLRLNPNLYESGKVCLSLLNTWTGTGSEMWNPGASTILQVLLSLQALVLNEKPYFNEAGYDQQIGQAEGEKNSVSYNENAFLVTCKSMLYLQRKPPKHFESLVEEHFNQRAQHILLACKAYSEGAPIGCAFECGKTMNQKDQKGTSTGFKIMLAKLFPKLVEAFSDKGTDCSQFI 925
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele15g1715 925 SUPERFAMILY UBC-like 673 848 IPR016135 -
Lele15g1715 925 CDD UBCc 681 834 IPR000608 -
Lele15g1715 925 ProSiteProfiles Ubiquitin-conjugating (UBC) core domain profile. 679 839 IPR000608 -
Lele15g1715 925 Pfam Ubiquitin-conjugating enzyme 683 830 IPR000608 -
Lele15g1715 925 PANTHER (E3-INDEPENDENT) E2 UBIQUITIN-CONJUGATING ENZYME 3 921 - -
Lele15g1715 925 MobiDBLite consensus disorder prediction 1 21 - -
Lele15g1715 925 Gene3D Ubiquitin Conjugating Enzyme 642 920 IPR016135 -
Lele15g1715 925 SMART ubc_7 682 839 - -
Lele15g1715 925 FunFam Probable ubiquitin-conjugating enzyme E2 23 641 918 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele15g1715 Lele-ChrLele15 10256269 10260554 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele15g1715 22 925 Miscellaneous Gene Families AT2G33770 50.714 0.0 902
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele15g1715 15 10256269 10260554 Lele15g1715 15 10256269 10260554 ECH
Lele13g0768 13 19548347 19553827 Lele15g1715 15 10256269 10260554 hybridization
Lele14g0658 14 17889823 17894677 Lele15g1715 15 10256269 10260554 hybridization