Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele14g0658 ATGATTGTTGGTGTTAAACAGTCTCCATTTGTAGCAGATAGAACAGGCTTCTCATTGATGGAAATGCACATTATAGATTCGGACTGGGAGACTTTCAGTGAGAGCAGCAGCAGCGAGGATCAAGAGGAAATTGATTTTCTATACGCTGGGCAAGCTCAGAGCATACTATCCAGTTTAGAGGAAAGCATTGGGAAAATTGATGATTTCCTCTTATTAGAAAGAGCATTTGTTCATGGGGATGTGGTTTTCTCCTTGTCAGATCCATCTGGACAGATGGGCAGGGTTATGGGTGTTGATGTGTTTGTGGATTTGGAAAGTGTTCACGGAAAATTATTAAAAAATGTAAACTCCAAGAGGCTTCTGAAAATTCGCTCCATTTCAGAAGGTGATTATGTGATTAAGGGGCCATGGCTTGGAAGAGTTCAAAAGGTGGTGGACAAAGTAACTGTATTATTTGATGATGGAACTAATTGTGAGGTCACCGCATTGGAAAGAGATAAAATCTTGCCTCTGACTTGTAATTTGGTTGAAGACTTGCAGTATCCATACTATCCAGGGCAGAGAGTAAGGGTAAATTCCTCAAGTTCTAAGTCAGCTAGATGGTTATGTGGAACTTGGAGAGACAATCAAGATGAAGGAACCGTTTGTTCTGTTGAAGAAGGTCTAGTGTATGTTAACTGGCTCGTGTTTGTTCCCATGGGTCCCGATTTTACTGGAAATGCTCCCCCATGCTGGCAAGATTCCAAAAACTTGACCTTGCTCTCATGTTTTTCACATGCAAACTGGCAGCTTGGTGACTGGTGCATGCTTGCAGTGGCAGACCAAAAGGAACAGAATTTCAGAAATTCATCTAGCAGGGGTCATACTAAGGAGCACATTAGGGCAAGAGGATATAAAAATGGAAACGTTAACTTCAATATTGGGGAACTTTTTGTTATTGCGAAAATAAGGACCAAAGTTGATATTGTATGGCAGGATGGTGGACACACTTTGGGATTAGATCCCCATACTCTACTCCCAGTGAATGTCATAGACACTCATGAATTTTGGCCTCAGCAGTTTGTGTTGGAAAAAGGTGCTTCGGATGATCATCCTAAGACCAGCGGTCAAAGATGGGGAGTTGTCCAATTTGTGGATGCGAAAGAGCGTACTGTAAAGGTACAATGGAATACAGTTTCCATACCCATGCCAGAGAATTTGGCTGGAGATATGATGGAAGAACCTGTGAGTGCCTATGAACTCATAGAGCACCCAGACTACTCCTATTGTTTTGGTGATATTGTTTTCAAGGCGGCTCAAAAACAGCTTGGTTGCCAAGCTGAGAAAGATCAAGCAAAGTCAGCAACTGACTTGAATGTGGAGTCTGCTGTTATAGACAGGAACCACATCAGTTATCAGAATGAGTTCCCTGATAACTGTTACCTGTCATGTATTGGCAACGTTATTGGTTTCAAAGATGGTGCTGTAGAGGTGAAATGGGCTTCTGGTTTAACCACCAAGGTTGCGCCTCACGAAATTCTTCGAATTGATAAGCATGAAGGTTCAACTGAAACCCCTGTTCCATATGAAGCAGATATTGAGGAGTTGACTCAAGAGATGAATGAGAATGGAAATCTTACTTCTGACAAAAAGGGAAAGGGCTTGTTAGATTTTGATGGTGATAGAGTGAATTGTGAAAGGCCTCCAGGGGAATGTAGTACCTTTTCCCTTCCTCGAGCTGCCATTGAAATTTTCTCCAGCATTAAGGCCAGCATTTTTCAAACATTTGGTGTAACATCGCTTTCGCGAGCAGTTTCTTTAGTCCCTACAACTGAAGAAGGAAATCAATCTGAAAATCTTAATAAGAAAGAAGTTTCAGAAACTTGTGAACTCTGCACTGAAGTGAATCCGAGGAGTGAATTGCAGTTTACCGAAGATATAACTCCGGATCAGGATGTTATTAGATTTTCTGAGAGGAAAGATATTCCATTTTCTTCAAATAGCAACAATTCAGATCGGTTTAAGCGGTTTGATATACTAGATAATTGCTCAGACCACCACTTCTTTGATGAGCAAAAAGGGTTGGCATTATCTCAGGTAAAAAGAGGGTGGGTGAAAAGGGTTCAGCAAGAATGGAGCATCCTAGAGAGAAATCTTCCAGAAACTATTTATGCCCGTGTGTTTGAAGAAAGAATGGATCTCCTGCGAGCAGCCATTGTCGGTGCACCTGGAACTCCTTATCATGATGGCTTATTCTTCTTCGATGTTTGTTTCCCTCCAGAGTATCCTAATGAACCTCCTCATTTCGAGTCACTCGTGGAAGAGCACTTCAACCAATGCGCACAACACTTGCTTCTCGCTTGCAAGGTGTATAGCGAAGGAGCTCCCATTGGATGTGCTTTTGAATGTTTAAAAACCATGCACCAAAAAGATCAGAAGGGAACTTCTACAGGTTTTAAAATCATGCTTGCTAAGCTCTTCCCCATGCTGGTAGAGGCGTTTTCCGGTAAAGGAATTGATTGCAGCCAGTTTGTTCAGTTGCAGAAGTAA 2529 0.4191 MIVGVKQSPFVADRTGFSLMEMHIIDSDWETFSESSSSEDQEEIDFLYAGQAQSILSSLEESIGKIDDFLLLERAFVHGDVVFSLSDPSGQMGRVMGVDVFVDLESVHGKLLKNVNSKRLLKIRSISEGDYVIKGPWLGRVQKVVDKVTVLFDDGTNCEVTALERDKILPLTCNLVEDLQYPYYPGQRVRVNSSSSKSARWLCGTWRDNQDEGTVCSVEEGLVYVNWLVFVPMGPDFTGNAPPCWQDSKNLTLLSCFSHANWQLGDWCMLAVADQKEQNFRNSSSRGHTKEHIRARGYKNGNVNFNIGELFVIAKIRTKVDIVWQDGGHTLGLDPHTLLPVNVIDTHEFWPQQFVLEKGASDDHPKTSGQRWGVVQFVDAKERTVKVQWNTVSIPMPENLAGDMMEEPVSAYELIEHPDYSYCFGDIVFKAAQKQLGCQAEKDQAKSATDLNVESAVIDRNHISYQNEFPDNCYLSCIGNVIGFKDGAVEVKWASGLTTKVAPHEILRIDKHEGSTETPVPYEADIEELTQEMNENGNLTSDKKGKGLLDFDGDRVNCERPPGECSTFSLPRAAIEIFSSIKASIFQTFGVTSLSRAVSLVPTTEEGNQSENLNKKEVSETCELCTEVNPRSELQFTEDITPDQDVIRFSERKDIPFSSNSNNSDRFKRFDILDNCSDHHFFDEQKGLALSQVKRGWVKRVQQEWSILERNLPETIYARVFEERMDLLRAAIVGAPGTPYHDGLFFFDVCFPPEYPNEPPHFESLVEEHFNQCAQHLLLACKVYSEGAPIGCAFECLKTMHQKDQKGTSTGFKIMLAKLFPMLVEAFSGKGIDCSQFVQLQK 842
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele14g0658 842 ProSiteProfiles Ubiquitin-conjugating (UBC) core domain profile. 696 842 IPR000608 -
Lele14g0658 842 SUPERFAMILY UBC-like 690 761 IPR016135 -
Lele14g0658 842 SMART ubc_7 699 814 - -
Lele14g0658 842 Pfam Ubiquitin-conjugating enzyme 700 764 IPR000608 -
Lele14g0658 842 PANTHER (E3-INDEPENDENT) E2 UBIQUITIN-CONJUGATING ENZYME 759 834 - -
Lele14g0658 842 Gene3D Ubiquitin Conjugating Enzyme 659 762 IPR016135 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele14g0658 Lele-ChrLele14 17889823 17894677 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele14g0658 759 836 Miscellaneous Gene Families AT2G33770 52.564 1.27e-17 86.3
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele14g0658 14 17889823 17894677 Lele14g0658 14 17889823 17894677 ECH
Lele14g0658 14 17889823 17894677 Lele15g1715 15 10256269 10260554 hybridization
Lele14g0658 14 17889823 17894677 Lele16g1752 16 10252268 10257278 hybridization