Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele13g0768 ATGAGCTTTCAGTATAGTTCTTTTGAACAGACAGGCTTCTCATTGATGGAAATGCACATTATGGATTCAGACTGGGAGACTTTTAGTGCGAGCAGCAGCGAGGATCAAGAGGAAATTGATTTTCTATATGCTGGGCAAGCTCGGAGCATACTATCCTGTTTAGAGGAAAGCATTGGGAAAATTGATGATTTTCTGTCATTTGAAAGAGCATTTGTTCATGGGGATGTCGTTTGCTCCTTGTCAGACCCATCTGGACAGATGGGCAGGGTTACAGGTGTTGATTTGTTTGTGGATTTGGAAAGTGTTCATGGAAAATTATTAAAAAATGTAAACTCCAAGAGGCTTTTGAAAATTCTCTCCATTTCAGAAGGTGATTATGTGATTAAGGGGCCATGGCTTGGAAGAGTTCAAAAGGTGGTGGACAAAGTAACTGTATTATTTGATGATGGAAATAAATGTGAGGTCACCGCATTGGAAAGATATAAGATCTTGCCTCTGACTCGTAATTTGCTTGAAGACTTACAGTATCCATACTATCCAGGGCAGAGAGTAAGGGTCAATTCCTCAACTTCTTCTAAGTCAACTAGATGGTTATGTGGAACTTGGAGAGACAGTCAAGATGAAGGAACCGTTTGTTCTGTTGAATCAGGGCTAGTGTATGTTAACTGGCTCGTGTTTGTTCCCATGGGTCCTGATTTTACTGGAAGTGCTCCCCCATGTTGGCAAGATTCCAAAAACTTGACCTTGCTCTCATGTTTTTCACATGCAAACTGGCAGCTTGGCGACTGGTGCATGCTTGCAGTGGCAGAACAAAAGGAACAGAATTTTGGTAACACATCTACTGGGGGTCTTACTAAGGAGCATATTATGGCAAGAGGATATAAAAATGGGAACGTTAACTTCAATATTGGGGAACTTTTTGTAATTGTGAAAATAAGGACCAAAGTTGATATTGTATGGCAGGATGGTGAACACACTTTGGGATTAGATCCCCATACTCTACTCCCAGTGAATGTCATTGACACTCATGAATTTTGGCCTCAGCAGTTTGTGTTGGAAAAAGGTGCTTCTGATGATCACCCTAAGCCCAGCTCTCAAAGATGGGGAGTTGTCCAATTCGTGGATGCAAAAGAGCGTACTATAAAGGTACAATGGGATACTGATTCCATATCCATGCCAGAGAATTTGGCTGGAGATAAAATGGAGGAAACTGTGAGTGCCTATGAACTCATAGAGCACCCAGACTACTCCTATTGTTTTGGTGATATTGTTTTCAAGGCGGCTCAAAAACAGCTTGGTTACCAAGCTGAGAAAGATCAAGCAAAGTCAGCAACTGACTTGAATGCGGAGTCTGCTCTTATAGACAGCAACCACATCAGTTATCAGAATGACTTCCCTGATAACTTGTCATGTATTGGCAACGTTATCGGTTTCAAAGATGGTGCTGTAGAGGTGAAATGGGCTACCGGTTTAACAACCAAGGTTGCGCCTCATGAAATTCTTCGAATTGATAAGCATGAAGGTTCAACTGAAACCCCTGTTCCATATGAAGCAGATATTGAGGAGTTGACTCAAGACATGACTGAGAATGGAAATCTTACTTCTAACAAAAAGGGAAAGGGATTGTTATATTTTGGTGGTGATAGAGTGAATTGTGAAAGGCCTCCAGGGGAATGTAGCACCTTTTCCCTTCCTCGAGCTGCCATTGAAATTTTCTCCAGCATTAAGGCCAGCATTTTTCAAACATTTGGTGTAACATCACTTTCACGAGCAGTTTCTTTGGTCCCTACAACTGAAGATGGAAATCAATCTGAAAATCTTAATAAGAAAGAAGTTTCAGAAACTTGTGAACTCTGCACTGAAGCAAATCCTAGGGGTGAATTGCAGTTTACTGAAGGCATAACTCCAGATCAGGATGCTATTAGATTTTCTGAGAGGAAAGATCTTCCATTTTCTTCAAATAGCAACAATTCAGATTGGTTTAAGCAGTTTGATATTATAGATAATTGCTCAGACCACCACTTCTTTGATGAGCAAAAAGGGTTGGCATTGTCTCAGGTAAAAAGAGGATGGGTGAAAAGGATTCAGCAAGAATGGAGCATCCTAGAGAGAAATCTTCCAGAAACAATTTATGTCCGTGTGTTCGAAGAAAGAATGGATCTCCTGCAAGCAGCTATTGTGGGTGCACCTGGAACTCCTTATCATGATGGCTTATTCTTCTTTGATGTTTGTTTCCCTCCAGAGTATCCTAGTGAACCACCTATGGTGCACTACAATTCGGGTGGGCTCAGATTAAACCCTAATTTGTACGAATCGGGAAAAGTCTGTCTGAGCCTCCTGAACACGTGGACTGGTACGGGCAGTGAAATGTGGAACCCAGGGGCCTCCACCATTCTTCAAGTCCTTCTCTCTCTGCAGGCCCTTGTCCTTAATGAAAAGCCTTATTTCAACGAGGCTGGATATGACCAGCAGATTGGCCAAGCCGAAGGAGAGAAGAACTCGGTGAGCTACAACGAAAATGCTTTCCTTGTCACCTGGAAATCAATGCTATATCTACTGAGAAAGCCACCCAAGCATTTTGAGTCACTCGTGGAAGAGCACTTCAACCAACGCGCACAACACATACTTCTCGCTTGCAAGGCGTATAGCGAAGGAGCTCCCATTGGATGTGCTTTTGAATATGGAAAAACCGTGCACCAAAAAGATCAGAAGGGAACTTCCACAGGTTTTAAAATCATGCTTGCTAAGCTCTTCCCCAAGCTCGTCGAGGCTTTTTCCGATAAAGGAATCGATTGCAGCCAGTTTATTTAG 2811 0.423 MSFQYSSFEQTGFSLMEMHIMDSDWETFSASSSEDQEEIDFLYAGQARSILSCLEESIGKIDDFLSFERAFVHGDVVCSLSDPSGQMGRVTGVDLFVDLESVHGKLLKNVNSKRLLKILSISEGDYVIKGPWLGRVQKVVDKVTVLFDDGNKCEVTALERYKILPLTRNLLEDLQYPYYPGQRVRVNSSTSSKSTRWLCGTWRDSQDEGTVCSVESGLVYVNWLVFVPMGPDFTGSAPPCWQDSKNLTLLSCFSHANWQLGDWCMLAVAEQKEQNFGNTSTGGLTKEHIMARGYKNGNVNFNIGELFVIVKIRTKVDIVWQDGEHTLGLDPHTLLPVNVIDTHEFWPQQFVLEKGASDDHPKPSSQRWGVVQFVDAKERTIKVQWDTDSISMPENLAGDKMEETVSAYELIEHPDYSYCFGDIVFKAAQKQLGYQAEKDQAKSATDLNAESALIDSNHISYQNDFPDNLSCIGNVIGFKDGAVEVKWATGLTTKVAPHEILRIDKHEGSTETPVPYEADIEELTQDMTENGNLTSNKKGKGLLYFGGDRVNCERPPGECSTFSLPRAAIEIFSSIKASIFQTFGVTSLSRAVSLVPTTEDGNQSENLNKKEVSETCELCTEANPRGELQFTEGITPDQDAIRFSERKDLPFSSNSNNSDWFKQFDIIDNCSDHHFFDEQKGLALSQVKRGWVKRIQQEWSILERNLPETIYVRVFEERMDLLQAAIVGAPGTPYHDGLFFFDVCFPPEYPSEPPMVHYNSGGLRLNPNLYESGKVCLSLLNTWTGTGSEMWNPGASTILQVLLSLQALVLNEKPYFNEAGYDQQIGQAEGEKNSVSYNENAFLVTWKSMLYLLRKPPKHFESLVEEHFNQRAQHILLACKAYSEGAPIGCAFEYGKTVHQKDQKGTSTGFKIMLAKLFPKLVEAFSDKGIDCSQFI 936
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele13g0768 936 SUPERFAMILY UBC-like 684 859 IPR016135 -
Lele13g0768 936 ProSiteProfiles Ubiquitin-conjugating (UBC) core domain profile. 690 850 IPR000608 -
Lele13g0768 936 FunFam Probable ubiquitin-conjugating enzyme E2 23 652 929 - -
Lele13g0768 936 CDD UBCc 692 845 IPR000608 -
Lele13g0768 936 Gene3D Ubiquitin Conjugating Enzyme 653 932 IPR016135 -
Lele13g0768 936 PANTHER (E3-INDEPENDENT) E2 UBIQUITIN-CONJUGATING ENZYME 21 932 - -
Lele13g0768 936 Pfam Ubiquitin-conjugating enzyme 694 841 IPR000608 -
Lele13g0768 936 SMART ubc_7 693 850 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele13g0768 Lele-ChrLele13 19548347 19553827 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele13g0768 16 936 Miscellaneous Gene Families AT2G33770 51.125 0.0 900
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele13g0768 13 19548347 19553827 Lele13g0768 13 19548347 19553827 ECH
Lele13g0768 13 19548347 19553827 Lele15g1715 15 10256269 10260554 hybridization
Lele13g0768 13 19548347 19553827 Lele16g1752 16 10252268 10257278 hybridization