Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele15g0394 ATGCGAGGCATGTTAATCCATCCAGATCCAGAGTGGAACGCAAGACCAGTCAACATGAGCTGTGGCGGCAATAGACAACGGGGCTTTGGGAGAAGAGTACCTGGAGAGAAAATGGGCGCTTCACAATCAGTCTCACAAAAAAGCATCCATGAATTCACTGTCAAGGATGCCAGGGGTGGTGATGTGGACCTCGGCATCTACAAAGGGAAAGTGCTTCTTGTTGTTAACGTCGCTTCTAAATGTGGATTTACGGATTCCAATTACACTCAGTTAACTGAGCTTTACGGCAGATACAAGGATAGGGGTCTTGAAATATTGGCATTTCCTTGCAACCAATTTCTGAAGCAAGAGCCTGGGACAAGCCAAGAGGCTCAAGAGTTTGCGTGCACAAGATACAAGGCTGAATATCCTATTTTTGGAAAGGTACGTGTGAATGGACCAGATGCCTCTCCGGTTTATAAATTCCTTAAATCAAAGAAAAGTGGGTTTCTGGGTTCCAGGATAAAGTGGAATTTCACCAAGTTTTTGGTTGACGAGGAGGGCCATGTGATCCAGCGTTATGGCCCTACCACTCCACCATTGGCATTTGAGAATGACATCAAGAAGGCGTTGGGGGAGGCTTGA 624 0.4631 MRGMLIHPDPEWNARPVNMSCGGNRQRGFGRRVPGEKMGASQSVSQKSIHEFTVKDARGGDVDLGIYKGKVLLVVNVASKCGFTDSNYTQLTELYGRYKDRGLEILAFPCNQFLKQEPGTSQEAQEFACTRYKAEYPIFGKVRVNGPDASPVYKFLKSKKSGFLGSRIKWNFTKFLVDEEGHVIQRYGPTTPPLAFENDIKKALGEA 207
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele15g0394 207 ProSitePatterns Glutathione peroxidases active site. 69 84 IPR029759 -
Lele15g0394 207 ProSitePatterns Glutathione peroxidases signature 2. 106 113 IPR029760 -
Lele15g0394 207 PRINTS Glutathione peroxidase family signature 168 177 IPR000889 GO:0004602|GO:0006979
Lele15g0394 207 PRINTS Glutathione peroxidase family signature 103 119 IPR000889 GO:0004602|GO:0006979
Lele15g0394 207 PRINTS Glutathione peroxidase family signature 67 84 IPR000889 GO:0004602|GO:0006979
Lele15g0394 207 Pfam Glutathione peroxidase 49 157 IPR000889 GO:0004602|GO:0006979
Lele15g0394 207 CDD GSH_Peroxidase 48 200 IPR000889 GO:0004602|GO:0006979
Lele15g0394 207 Gene3D Glutaredoxin 40 206 - -
Lele15g0394 207 ProSiteProfiles Glutathione peroxidase profile. 39 207 IPR000889 GO:0004602|GO:0006979
Lele15g0394 207 PANTHER GLUTATHIONE PEROXIDASE 42 204 IPR000889 GO:0004602|GO:0006979
Lele15g0394 207 FunFam Glutathione peroxidase 40 206 - -
Lele15g0394 207 SUPERFAMILY Thioredoxin-like 48 205 IPR036249 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele15g0394 Lele-ChrLele15 2275143 2278741 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele06g1361 06 8738310 8747642 Lele15g0394 15 2275143 2278741 CCT
Lele07g1568 07 9667470 9681231 Lele15g0394 15 2275143 2278741 CCT
Lele08g1357 08 8680397 8690003 Lele15g0394 15 2275143 2278741 CCT
Lele13g2011 13 27408821 27411992 Lele15g0394 15 2275143 2278741 hybridization