Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele06g1361 ATGGCGCCTAGCCGCAGAAAGGGCGCTAGCAAAGCAGCAGCCGCTACCGCCGCTCGCCGCCAATGGAAGGTCGGCGATCTTGTACTTGCTAAAGTGAAAGGCTTCCCTGCTTGGCCTGCTACGGTAAGTGAACCTGAGAAGTGGGGTTACTGCACTGACTGGAAGAAAGTACTTGTTTACTTCTTTGGCACCCAACAGATAGCTTTCTGCAATCCTGCTGATGTTGAAGCATTCACTGAAGAGAAGAAACAATCTCTTCTTGTTAAACGTCAAGGAAGGGGTGCTGACTATGTCCGTGCTGTACATGAGATTATTGATAGTTATGACAAATTGAAGGAGACGCAAGTTGATATAACCAATTCTGGTGAAGTGTCTGGTGTAAATGTTACAATTCCTGTGGATTCATCAGCTAAATTATCTGCCAACTTTGGATTAAAGGATGAGACACAGGACCATGATTCAGTACATAATTCTCAAATTAAAACTTTGAATTCTTTCACTGATCAACCTGAGACAACATATGCTGCTGAGGAAGCCTTGGCAGTTGAACCAAAGGATGAATCATCTAGTAAGGAGATTTCGTCAAAGGAGCTTAAAGATCATGCTGGTGCTACTGCAAAATCTCCTTATCCAGTTACTTGCTCTTCTCAAAAAAGATCTGTGGACTTGCATCCTCAGGGTAATATCACACAGAGAAATGCACCGGTCCGGAAGTCTAGAAGCTCATCACGAATTCAAAGCTTTGTGATGCCTTGTAGTGATGGCGGAAAAACTGCCACTGATGGATCAGCTAGTGCAATTCAGCATGTATCTGTGAGGAGAAGTAAACGCTGTAAGAAATCACCTGATATTTCTGAATGTGATGATGTTGATACATCTGCATTTGCTTCCAATGATAGCATGGAAGACAATCGTTCTGAAATTCTCACTATTGATTCCGATCCCCTTAGCCTGCATGAGGGAAGTACCATTGACTCAAATTGTAAACTTGAACCCTCTGAGACTATTGAGTGCCCAGAAGGAGAATTTGAGTTGAACAAGGGATTGGATGAACTAAAGACTCTAGTCAAGAAGAAAAAAAGAAAGCCAAATCGGAAGAGGTTAACTGATGATTCTGTGAAGCAAACCACTATGCTAGAGGAGGAGGCTGGTGTGTTGAATTCCAGTCAAAGGTTACAGGATGTTAGTGAAAACCCAAAAGATAGATGCTCCAAGCAAGATGGTGATGAGCACCTGCCACTTCTGAAACGAGCTAGAGTCAGAATGGGTAAATCATCAGCAACAGACGTGGAACACAACAGCGTTACAGAATCTCAAGATAAAAGATCTGAGAACAGTATAAACTCATTTCAGCATATAATTATGTCCTCAACTCATGACAATCTTAGTGCTGCTGACGGAGATTTGTCTGTTTCGAATGTGGTAATGGATAATGTTTCTCCTCCAAAGAGTTTAGCCCCATGTTCTGAAAGTGGGCCTCAGATTTGTAAAATTAAAGACCAAACTTTAGGTTGTTCTGTGGATGGTGAAGCTGCTTTACCTCCATCTAAACGCCTCCATCGTGCTCTTGAGGCCATGTCAGCTAATGCTGCTGAAGATGGTGATGATCAAGATCGTGTAGAGTTATCACTCACCGCAATGACATCAAATAGTAGGTGCTGTACATCTTCCATCAATAAATGGCCTTGTACGGCCATTAATAGTCAAGGTGAGAATGACTTCGAAATGCTAGGGATGAGCACTTGTGGCAATGATTCTTCTCATTTTAAAGCATGCAGTTTCTCAACCGGTTTAAATCCAGTAATCTGTAATCCTACAGGGAATAAATTATCTGTAGAGATGGATAAGCAAACGGCTGAGCTTCTAACCCATGAAATTTGCAAGGATGCCCTACCAGATGATGGCAAAGACAAAGAAGTTGGCAAAGAACCTACTAATTCTGTGGTATGTCAGACTGATGGATCTGACGTCCAAATTCATTTACTTGGAAATTTGTCTCCTAATCTTGAAATGAAATGTTGTGAAGTTGGAAGCAGTCAAGATTTGCCTTGTTCATTGCTGCTCCCAAATGATGAAAGCAATATCAGAGCCGCTGACATTTCAAATAAATCATCTGGTTTATCAGTACATCTTGGAACAGGTCATGATCCTGCATCAGGTGCCAATGAAAGTGGTGAATTTTCAACCCAAAATATTACTCATGTGCCTCAAAATGAAGTTCCAGAAAATACTGGGTGCTTGAAACCTGCTGTTGATGATAGCAACAATGTGAATTATATGTGTGAGGCTGTGAAAGATGTCATATGTAAAGAACCCAAGGAGGATATGAATTCTGTTTCAATTTCTGATGACTGCTTTGGTGAAAAGGACATTATAGGTCTTCAGCCAAGTCCATCTTTAACAGATGGGGGAGATTGCCCTCCACAAGGATCCCCGCCAAATACGTCATTTTGCAATGTTTCTACATCAGACAGTAGCAATATCCTTCAAAACAATGGCAGTTGTAGCCCTGATGTACATCTACACCAGAAGCAAACTTTCTCTGGCCCTGATGGGAAGATAGATGGGTTTGCAGCAACTCAACGATCAAAAAACAAGTCCACTGAAGCAGGACATGCTGCTTTGCTGTACTTTGAAGCAACGCTTGGGACATTGACAAGGACCAAGGAGAGTATTGGTCGTGCTACACGCATAGCTATTGACTGTGCCAAGTTTGGCAGTGCAGCTAAGGTGGTGGAAATTCTTGCCCGTAGTCTGGAAACTGAGTCAAGCTTGCATCGACGTGTGGATTTGTTTTTTCTTGTTGATTCTATTGCACAGTGTTCTCGAGGTTTAAAGGGTGATGTTGGTGGAGTGTATCCTTCTGCCATCGAAGCAGTTCTTCCACGCCTATTGTCATCTGCGGCCCCTCCTGGAAATACCGCACAAGAAAATCGTAGGCAGTGTCTTAAGGTTCTAAGGTTGTGGTTGGAGAGAAGAATCCTTCCAGAATCCATTATCCGTAATCATATCCGGGAACTGGACTTGTATAGTTTGTCTGCTTCTTCAGGTGCCTTCTCACGACGTACTTTAAGAACAGAGAGGGCTTTAGATGACCCTGTCAGAGAAATGGAGGGTATGCTTGTTGACGAATATGGAAGCAACTCAAGTTTTCAGCTACCTGGATTTTGCATGCCCCGAATGCTTAAATGTGAAGATGATGGGAGCGATTCTGATGGGGGGAAATTTGAGGCAGTCACTCCTGAGCATGATTATGAAGTGCACAGAGTGTGTGAAATGACTCCTGGACTTGAAAAGCATAGACATATCTTGGAAGATGTTGATGGGGAGCTTGAAATGGAAGATGTGTCTCCTTGTGATATTGAAAATTCAGTTTTAGATATTAATGGAGGAAATAAGGATGCCACACAGGCGTCTAATAGTGTGACAAATAATCTGATGGAGAAGAATATTCCTGTGTCCTTTATTCCTCCTTTGCCTCAGGATGTACCTCCATCGTCCCCACCACTGCCTTTATCCTCTCCACCACCCCCGCCTCCTCCCCAGCCTCCTTCCCTCCCCTTGATGCCAGCTATCTCCCATCCATATAGCACTGGAGTTGTCTCAAAACTTAATGAAGATGCACAGATTGTGAAAGATAACTCCCTCCCCTCAATGACTGAGCCTTTGAGTGCACCAAGGGATAGCCAACCTTTGCATGAGGTTGTGCACTATCGAGTTCCAGAATGTAGGGATATGCTCATGCAGCTGGCTGAGTCTACTTCCTCTTTCAGCAGTTATCCACCACCACCTGACAATTTTCATTATTTTGATGGTGCTACTGTGCATGCTAAAGGTTACCCCTTGCGTCCACCTCACCAAGTGCCCTCGAACCAGTTTTCTTTTGTTCATGGGGAACAGCATGTGAAGCCACGAAGGGAGGCTGCACGCCCTTCATACTCCAATAGGCACCACTCTGTGCAAAACATGGAGAGAGAGAACTTCCGCAATAATCATGATAGATTAAAACCACCTCAATTTGACTTCCGAGAGAGATGGAGAGGTCCTGCTCCTTACTCTGGTTCTCGGTGTCAGGATAGAGGTGCACCTGCCCCTTATGGCTGTAATCCATGTGAATCAGCTAGATTACCAGACCACGGCTGGAGATTCCCTCCCCGGTCAATGAATCACAGGAACTCTGTGCCTTTTAGACAACCCTTTGAAGATGCAATTCCGATGGCAAGTAGAGGTCCAGGCTTTTGGCGACCAAGATGA 4254 0.4379 MAPSRRKGASKAAAATAARRQWKVGDLVLAKVKGFPAWPATVSEPEKWGYCTDWKKVLVYFFGTQQIAFCNPADVEAFTEEKKQSLLVKRQGRGADYVRAVHEIIDSYDKLKETQVDITNSGEVSGVNVTIPVDSSAKLSANFGLKDETQDHDSVHNSQIKTLNSFTDQPETTYAAEEALAVEPKDESSSKEISSKELKDHAGATAKSPYPVTCSSQKRSVDLHPQGNITQRNAPVRKSRSSSRIQSFVMPCSDGGKTATDGSASAIQHVSVRRSKRCKKSPDISECDDVDTSAFASNDSMEDNRSEILTIDSDPLSLHEGSTIDSNCKLEPSETIECPEGEFELNKGLDELKTLVKKKKRKPNRKRLTDDSVKQTTMLEEEAGVLNSSQRLQDVSENPKDRCSKQDGDEHLPLLKRARVRMGKSSATDVEHNSVTESQDKRSENSINSFQHIIMSSTHDNLSAADGDLSVSNVVMDNVSPPKSLAPCSESGPQICKIKDQTLGCSVDGEAALPPSKRLHRALEAMSANAAEDGDDQDRVELSLTAMTSNSRCCTSSINKWPCTAINSQGENDFEMLGMSTCGNDSSHFKACSFSTGLNPVICNPTGNKLSVEMDKQTAELLTHEICKDALPDDGKDKEVGKEPTNSVVCQTDGSDVQIHLLGNLSPNLEMKCCEVGSSQDLPCSLLLPNDESNIRAADISNKSSGLSVHLGTGHDPASGANESGEFSTQNITHVPQNEVPENTGCLKPAVDDSNNVNYMCEAVKDVICKEPKEDMNSVSISDDCFGEKDIIGLQPSPSLTDGGDCPPQGSPPNTSFCNVSTSDSSNILQNNGSCSPDVHLHQKQTFSGPDGKIDGFAATQRSKNKSTEAGHAALLYFEATLGTLTRTKESIGRATRIAIDCAKFGSAAKVVEILARSLETESSLHRRVDLFFLVDSIAQCSRGLKGDVGGVYPSAIEAVLPRLLSSAAPPGNTAQENRRQCLKVLRLWLERRILPESIIRNHIRELDLYSLSASSGAFSRRTLRTERALDDPVREMEGMLVDEYGSNSSFQLPGFCMPRMLKCEDDGSDSDGGKFEAVTPEHDYEVHRVCEMTPGLEKHRHILEDVDGELEMEDVSPCDIENSVLDINGGNKDATQASNSVTNNLMEKNIPVSFIPPLPQDVPPSSPPLPLSSPPPPPPPQPPSLPLMPAISHPYSTGVVSKLNEDAQIVKDNSLPSMTEPLSAPRDSQPLHEVVHYRVPECRDMLMQLAESTSSFSSYPPPPDNFHYFDGATVHAKGYPLRPPHQVPSNQFSFVHGEQHVKPRREAARPSYSNRHHSVQNMERENFRNNHDRLKPPQFDFRERWRGPAPYSGSRCQDRGAPAPYGCNPCESARLPDHGWRFPPRSMNHRNSVPFRQPFEDAIPMASRGPGFWRPR 1417
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele06g1361 1417 ProSiteProfiles CID domain profile. 870 1011 IPR006569 -
Lele06g1361 1417 MobiDBLite consensus disorder prediction 156 172 - -
Lele06g1361 1417 MobiDBLite consensus disorder prediction 1153 1191 - -
Lele06g1361 1417 MobiDBLite consensus disorder prediction 1157 1190 - -
Lele06g1361 1417 Pfam CID domain 878 1001 IPR006569 -
Lele06g1361 1417 MobiDBLite consensus disorder prediction 180 203 - -
Lele06g1361 1417 SUPERFAMILY Tudor/PWWP/MBT 18 115 - -
Lele06g1361 1417 SMART 558neu5 877 1008 IPR006569 -
Lele06g1361 1417 MobiDBLite consensus disorder prediction 149 244 - -
Lele06g1361 1417 MobiDBLite consensus disorder prediction 395 426 - -
Lele06g1361 1417 CDD HDGF_related 20 104 IPR035496 -
Lele06g1361 1417 Gene3D - 3 108 - -
Lele06g1361 1417 MobiDBLite consensus disorder prediction 380 444 - -
Lele06g1361 1417 Pfam PWWP domain 25 108 IPR000313 -
Lele06g1361 1417 ProSiteProfiles PWWP domain profile. 24 81 IPR000313 -
Lele06g1361 1417 PANTHER HEPATOMA-DERIVED GROWTH FACTOR-RELATED 1 1114 - -
Lele06g1361 1417 MobiDBLite consensus disorder prediction 802 823 - -
Lele06g1361 1417 MobiDBLite consensus disorder prediction 209 244 - -
Lele06g1361 1417 Gene3D - 876 1011 IPR008942 -
Lele06g1361 1417 FunFam Enhancer of ag-4 2 872 1013 - -
Lele06g1361 1417 SMART PWWP_4 22 79 IPR000313 -
Lele06g1361 1417 MobiDBLite consensus disorder prediction 796 823 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele06g1361 Lele-ChrLele06 8738310 8747642 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele06g1361 06 8738310 8747642 Lele13g2011 13 27408821 27411992 CCT
Lele06g1361 06 8738310 8747642 Lele15g0394 15 2275143 2278741 CCT
Lele06g1361 06 8738310 8747642 Lele16g0418 16 2262667 2263512 CCT
Lele06g1361 06 8738310 8747642 Lele06g1361 06 8738310 8747642 ECH
Lele06g1361 06 8738310 8747642 Lele07g1568 07 9667470 9681231 hybridization
Lele06g1361 06 8738310 8747642 Lele08g1357 08 8680397 8690003 hybridization