Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele15g0149 ATGGCACACGCTCCGCAAACCCTTGTGGCCACCGAATCAGAGCCTGATGAACCTCCTCCGCCAGGCCCTCTTTCTCCTCCCTCTCCAAACCCTACTTCTCCCAACCGCGTGACGAATCCGGATTCCACCCCAATTCCGAACCTCCTCCATATTTCCTTCAATCAGGATTCTGGCTGCTTCGCCGCGGGCACAGACCATGGTTTCCGGATCTACAATTGCGATCCATTCCGCGAGATATTTCGGCGGGACTTTGGTGCAGGTGGTGGAATCGGTTTAGTTCAGATGTTGTTTCGTTGCAACATACTTGCCTTTGTCGGTGGCGGAGCTGACCCTATTTACCCAAGTAATAAAGTAATGATTTGGGATGACCATCAGTCCCGGTGCATCGGCGAGCTATCGTTTCGATCCGAGGTCAAAGGGGTTCGTCTTAGAAGGGACCGAATTGTGGTGGTTCTGGTGCATAAGATATTTGTATATAATTTCGCAGATCTTAAATTGTTGCACCAAATTGAGACAACGGCCAACCCAAAGGGACTTTGTGAGGTTTCGCATGTTTCAGGGACAATGGTGTTGGTCTGTCCAGGGTTGCAGAAGGGTCAGGTGAGAGTCGAGCATTACGCCTCAAAGCGGACCAAGTTTATAATGGCGCACGATTCTAGAATAGCTTTCTTCGCACTCACGCAGGATGGCCGGTTGCTTGCCACCGCCAGCAGCAAGGGAACTCTGGTCAGGATTTTCAATACATTGGACGGTTCATCGCTCCAAGAGGTAAGGAGGGGTGCAGATCGAGCAGAGATATACAGCCTGGCCTTTTCTGCTACTGCACAGTGGCTAGCTGTCTCAAGTGACAAAGGAACTGTTCATGTCTTCAACCTGAAGGTTGATTCAGGACTATTGGGGCATGAGAGAGTGCAGAGTGCATCCGAATCTAATCCTGCTAACCCGTCAGCAGTTTCATCTCTTTCATTAATAAAAGGTGTTTTGCCCAAGTATTTTAGCTCAGAATGGTCCGTGGCACAGTTTCGCTTGCATGAAGGTTTGCAATATATTGTTGCCTTCGGCCATCAGAAGAACACAATTGTAATACTTGGGATGGATGGAAGCTTCTACCGATGCCAGTTTGATCCGGTAAATGGTGGAGAGATGAGCCAAGTTGAATATTATAACTTCTTGAAGCCAGGAGAAATATTCTAG 1194 0.4866 MAHAPQTLVATESEPDEPPPPGPLSPPSPNPTSPNRVTNPDSTPIPNLLHISFNQDSGCFAAGTDHGFRIYNCDPFREIFRRDFGAGGGIGLVQMLFRCNILAFVGGGADPIYPSNKVMIWDDHQSRCIGELSFRSEVKGVRLRRDRIVVVLVHKIFVYNFADLKLLHQIETTANPKGLCEVSHVSGTMVLVCPGLQKGQVRVEHYASKRTKFIMAHDSRIAFFALTQDGRLLATASSKGTLVRIFNTLDGSSLQEVRRGADRAEIYSLAFSATAQWLAVSSDKGTVHVFNLKVDSGLLGHERVQSASESNPANPSAVSSLSLIKGVLPKYFSSEWSVAQFRLHEGLQYIVAFGHQKNTIVILGMDGSFYRCQFDPVNGGEMSQVEYYNFLKPGEIF 397
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele15g0149 397 MobiDBLite consensus disorder prediction 14 34 - -
Lele15g0149 397 Pfam WD domain, G-beta repeat 260 291 IPR001680 GO:0005515
Lele15g0149 397 SMART WD40_4 250 291 IPR001680 GO:0005515
Lele15g0149 397 SMART WD40_4 207 247 IPR001680 GO:0005515
Lele15g0149 397 SMART WD40_4 38 72 IPR001680 GO:0005515
Lele15g0149 397 MobiDBLite consensus disorder prediction 1 46 - -
Lele15g0149 397 SUPERFAMILY WD40 repeat-like 46 369 IPR036322 GO:0005515
Lele15g0149 397 PANTHER WD-REPEAT PROTEIN INTERACTING WITH PHOSPHOINOSIDES WIPI -RELATED 46 390 - -
Lele15g0149 397 FunFam Autophagy-related protein 18a isoform A 46 376 - -
Lele15g0149 397 Gene3D - 44 378 IPR015943 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele15g0149 Lele-ChrLele15 914146 916377 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele05g1498 05 9593431 9597173 Lele15g0149 15 914146 916377 CCT
Lele13g2261 13 28757175 28759064 Lele15g0149 15 914146 916377 hybridization
Lele14g2197 14 27101268 27103100 Lele15g0149 15 914146 916377 hybridization