Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele05g1498 ATGGTTCGACTTCTGCTTCGTCTGCTCTTGCTGGTTGATGGGTATTGTTTCCGTTTAGCCTTTGTTATGCCTGATTGGAAATTTTACGGCGAAGTCAAAAGAATAATCTCTATGTCAGTTGCACCAGTTGAGAGTATTGCCTCACTAAGCAGTGATATATTCTATGACATATTACACCGTCTTGATGGTCCAACTTTGGCTAGTGCTGCTTGTACTTGTGCAGCTTTCTGTTCCATTTCAAAAGAAGAGAGTTTATGGGAAAATGTATGTTCATCCATGTGGCCTTCAACCAATAGAGAGGATGTCAAAAGTTTAATATCTACTATTGGTGGGTTCAGAAAATTCTATGCAGATTGTTTCCCACTTATTGTAAACAAGGAGGTCGTGGAGTATCAACCGAGTTACGATCTTGAATACCCTGAAGACTGGACTGAGGCTGAATATTACGGGGAAATGAATGAATCTGAAAGTATCTCTCCATCAGATTTTGTTTCTATTATAGATATCAGGTATAAAGACAAGCCAATCTGCTCCAAAGTATTATGGGGAATTCCAAATGCAAATGGCTTCAATGGTTGGTTTCACAACTGCCCTTTCCGGATTGATCCCCTCACTTACGCAGATAGAGATGACAACAATGATGGAGTGGTTACCCTTTCTGAATCTGATGGTCTACCACCAATTACGTCCATGGAAAGAGAGAGGAAAGATGGGAAGCTGTGGCGGGAGCTCCGGGAGGGGCTCCAGCTCAGTTGGATAATTGTAAACAGAAAAATGAAGCAAGCAGCTAATCTTGCTAGCTGGAGTCCTCTTGGTGGTCAAAGACATTGGCCAACTGATAAGGATTTTGTGATACGGTTTGGATCTGTTCTTCCTGCCAAGGACATTCTTCCTTGTCAGGTAGTGGAATGCATCCTTATTATGAAGTTCAGAATGGTTCGCAGCCAAGAGGAAGGAGCCCAAACAACTCTTAGATTAACAGAGCTGAGCATGCAGTTGGAAGACATGGAAGGAGCTCATGTTAATGGAAGAAACAGCTTGCTTATTCTTAAGGAAGCTCTTAGCTGCAGAAGGAGCAAAAATTATAGTGAAGTACTCGAGTCTTGTCGAATGTATTCAAAAGTACAGAATGAGTTAAGAGAGGAGAAAATGAGAAGCGAGAGTAGGCTGGATAGACTTTGCATTCTAAGTGGCATTGCTGCTTTCATGACATTCTGGTACTGTGTATTGTGA 1233 0.4185 MVRLLLRLLLLVDGYCFRLAFVMPDWKFYGEVKRIISMSVAPVESIASLSSDIFYDILHRLDGPTLASAACTCAAFCSISKEESLWENVCSSMWPSTNREDVKSLISTIGGFRKFYADCFPLIVNKEVVEYQPSYDLEYPEDWTEAEYYGEMNESESISPSDFVSIIDIRYKDKPICSKVLWGIPNANGFNGWFHNCPFRIDPLTYADRDDNNDGVVTLSESDGLPPITSMERERKDGKLWRELREGLQLSWIIVNRKMKQAANLASWSPLGGQRHWPTDKDFVIRFGSVLPAKDILPCQVVECILIMKFRMVRSQEEGAQTTLRLTELSMQLEDMEGAHVNGRNSLLILKEALSCRRSKNYSEVLESCRMYSKVQNELREEKMRSESRLDRLCILSGIAAFMTFWYCVL 410
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele05g1498 410 Gene3D - 35 139 - -
Lele05g1498 410 SUPERFAMILY F-box domain 43 116 IPR036047 GO:0005515
Lele05g1498 410 PANTHER F-BOX PROTEIN-RELATED 43 407 IPR045283 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele05g1498 Lele-ChrLele05 9593431 9597173 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele05g1498 05 9593431 9597173 Lele13g2261 13 28757175 28759064 CCT
Lele05g1498 05 9593431 9597173 Lele14g2197 14 27101268 27103100 CCT
Lele05g1498 05 9593431 9597173 Lele15g0149 15 914146 916377 CCT
Lele05g1498 05 9593431 9597173 Lele16g0155 16 936047 938124 CCT
Lele05g1498 05 9593431 9597173 Lele05g1498 05 9593431 9597173 ECH
Lele05g1498 05 9593431 9597173 Lele07g1559 07 9607409 9610073 hybridization
Lele05g1498 05 9593431 9597173 Lele08g1349 08 8615976 8618598 hybridization