Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele13g2261 ATGTTGTTTCGTTGCAACATACTTGCCTTTGTCGGTGGCGGAGCTGACCCTATTTACCCAAGTGACAAAGTAATGATTTGGGATGACCATCAGTCCCGGTGCATCGGCGAGCTATCGTTTCGATCCGAGGTCAAAGGGGTTCGTCTTAGAAGGGACCGAATTGTGGTGGTTCTGGTGCATAAGATATTTGTATATAATTTCGCAGATCTTAAATTGTTGCACCAAATTGAGACAACGGCCAACCCAAAGGGACTTTGTGAGGTTTCGCATGTTTCAGGGACAATGGTGTTGGTCTGTCCAGGGTTGCAGAAGGGTCAGGTGAGGGTCGAGCATTACGCCTCAAAGCGGACCAAGTTTATAATGGCGCATGATTCTAGAATAGCTTTCTTCGCACTCACGAAGGATGGCCGGTTGCTTGCCACCGCCAGCAGCAAGGGAACTCTGGTCAGGATTTTCAATACATTGGACGGTTCATCGCTCCAAGAGGTAAGGAGGGGTGCAGATCGAGCAGAGATATACAGCCTGGCCTTTTCTGCTACTGCACAGTGGCTAGCTGTCTCAAGTGACAAAGGAACTGTTCATGTCTTCAACCTGAAGGTTGATTCAGGACTATTGGGCAATGAGAGAGTGCAGAGTGCATCCGAATCTAATCCTGCTAACCCGTCAGCAGTTTCATCTCTTTCATTCATAAAAGGTGTTCTGCCCAAGTATTTTAGCTCAGAATGGTCCGTGGCGCAGTTTCGCTTGCATGAAGGTTTGCAATATATTGTTGCCTTCGGCCATCAGAAGAACACAATTGTAATACTTGGGATGGATGGAAGCTTCTACCGATGCCAGTTTGATCCGGTAAATGGTGGAGAGATGAGCCAAGTTGAGTATTATAACTTCTTGAAGCCAGGAGAAATATTCTAG 912 0.4693 MLFRCNILAFVGGGADPIYPSDKVMIWDDHQSRCIGELSFRSEVKGVRLRRDRIVVVLVHKIFVYNFADLKLLHQIETTANPKGLCEVSHVSGTMVLVCPGLQKGQVRVEHYASKRTKFIMAHDSRIAFFALTKDGRLLATASSKGTLVRIFNTLDGSSLQEVRRGADRAEIYSLAFSATAQWLAVSSDKGTVHVFNLKVDSGLLGNERVQSASESNPANPSAVSSLSFIKGVLPKYFSSEWSVAQFRLHEGLQYIVAFGHQKNTIVILGMDGSFYRCQFDPVNGGEMSQVEYYNFLKPGEIF 303
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele13g2261 303 Pfam WD domain, G-beta repeat 166 197 IPR001680 GO:0005515
Lele13g2261 303 FunFam Autophagy-related protein 18a isoform A 1 282 - -
Lele13g2261 303 PANTHER WD-REPEAT PROTEIN INTERACTING WITH PHOSPHOINOSIDES WIPI -RELATED 1 296 - -
Lele13g2261 303 SUPERFAMILY WD40 repeat-like 21 277 IPR036322 GO:0005515
Lele13g2261 303 Gene3D - 7 283 IPR015943 GO:0005515
Lele13g2261 303 SMART WD40_4 113 153 IPR001680 GO:0005515
Lele13g2261 303 SMART WD40_4 156 197 IPR001680 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele13g2261 Lele-ChrLele13 28757175 28759064 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele05g1498 05 9593431 9597173 Lele13g2261 13 28757175 28759064 CCT
Lele13g2261 13 28757175 28759064 Lele15g0149 15 914146 916377 hybridization
Lele13g2261 13 28757175 28759064 Lele16g0155 16 936047 938124 hybridization