Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele12g0637 ATGTGGCATTTAGTAGACTCTTACATGGATCGGCTGCTAAAAGCTGCAAGAGCATCCGGTTCCCTTAACCTCTCAAATCGCTCGCTCAGGGAAGTTCCAAATGAGGTGTACCGGAATCTGGAGGGTGGTGGTGGTGATGATAAGTGGTGGGAGGCCGTGGATCTCCAAAAGGTCATCTTGGCTCATAATGATATTGAATCATTAAAGGAAGATCTTAGAAACTTAATTTCACTAACTGTGTTGAACGTTAGCCACAACAGACTCTCTGAGCTTCCAGCTGCAATAGGAGAGCTACCTCAGCTAAAGTTGTTAGATGTTTCGTTCAATTTGATAAATAAAATACCAGAGGAAATTGGATCAGCAGCATCACTTGTTAAGCTTGATTTCTCTAACAATCAACTGAAGGAGCTTCCGAGCTCACTTGGCCTGTGTATGGAATTGTCAGAATTGAAGGGATCAAACAACCTCATTGCCAGCTTACCAGATGATTTATCAAATTGTTCAAAATTGAGAAAGCTAGACATGGAGGGAAACAAACTAACAGCGATACCTGAAAACCTCATTTCTTCATGGACCAAGCTTACTGAATTGAATGCATCAAAAAACTTGCTGAATGGCATACCTGCCAGCATTGGAGGTCTTTCTCATCTAATTCGACTTGACCTTCATCAGAACAGAATCTCATCAATCCCTTCATCAATCATGGGTTGCCATTCACTTGCAGAGTTTTATTTGGGGAATAACAACCTTTCTTCTGTACCAGCGGAGATATGGACACTCTCACGTCTAGGGACTTTAGATCTTCACTCTAACCAGTTGAAGGAGTATCCAGTAGAGGCATGCAAGTTGGGTCTTTTAGTCTTAGATCTTTCAAACAATTCATTGAGTGGCTTACCTGCTGAATTGGGCAAGATGACTACCTTGAGGAAACTTTTGCTTACGGGCAATCCTTTGCGGACTCTTCGAAGCTCATTAGTCTCTGGACCTACTCCAGCACTGCTGAAGTTTCTTCGAAGTAGACTTTCTGAGAGTGAAGAGTCTGAATCTACAATCAGTACAAAAGAGGATGTAATTGCAAAGGCTACTAGATTGTCCATCACTTCAAAGGAACTTTCTTTGGAAGGGATGGGGTTGAGTGCTGTTCCATCAGAAATATGGGAATCAGGGGAGATAATAAAAGCTGATCTTTCAAGAAATTCCATTGAGGAGTTGCCAGTGGAGCTCTCCTCTTGTGTTTCCCTCCAGACACTGATTTTATCTAAGAACAAAATTAAAGATTGGCCCGGTTCAATTCTTAAATCAATTTCAAGTCTTTCTTGTTTGAAGCTGGACAACAATCCCCTGAGACAGATTCCTGCAGATGGTTTCAAAACTGTGCCTATGCTTCAGATTATTGATCTAAGTGGTAATGCAGCTTCACTGGCAAATAGTCCTGCATTCTCTAGCATGCCACATCTGCAAGAGCTTTACCTGAGAAGAATGCAACTAAGTGAAGTCCCCTCAGATGTATCGGTGCTATCTCAACTGCGAATCCTTGACTTGAGTCAAAATTCCCTTCAATCGGTCCCATTGGGGTTCAAAAATCTCACTTCTCTCATGGAGCTTGACCTATCTAATAATAACATCTCCGTCCTTCCCCCTGAACTGGGTTTGCTGGAATCAAGCCTTCAAGCATTGAGACTTGATGGAAATCCTCTCAGAAGCATCCGTAGGACTATCTTGGATAAAGGATCGAAAGCTGTTCTGAAATATTTGAAGGACAAATTGCCGGAGCAATAG 1779 0.4221 MWHLVDSYMDRLLKAARASGSLNLSNRSLREVPNEVYRNLEGGGGDDKWWEAVDLQKVILAHNDIESLKEDLRNLISLTVLNVSHNRLSELPAAIGELPQLKLLDVSFNLINKIPEEIGSAASLVKLDFSNNQLKELPSSLGLCMELSELKGSNNLIASLPDDLSNCSKLRKLDMEGNKLTAIPENLISSWTKLTELNASKNLLNGIPASIGGLSHLIRLDLHQNRISSIPSSIMGCHSLAEFYLGNNNLSSVPAEIWTLSRLGTLDLHSNQLKEYPVEACKLGLLVLDLSNNSLSGLPAELGKMTTLRKLLLTGNPLRTLRSSLVSGPTPALLKFLRSRLSESEESESTISTKEDVIAKATRLSITSKELSLEGMGLSAVPSEIWESGEIIKADLSRNSIEELPVELSSCVSLQTLILSKNKIKDWPGSILKSISSLSCLKLDNNPLRQIPADGFKTVPMLQIIDLSGNAASLANSPAFSSMPHLQELYLRRMQLSEVPSDVSVLSQLRILDLSQNSLQSVPLGFKNLTSLMELDLSNNNISVLPPELGLLESSLQALRLDGNPLRSIRRTILDKGSKAVLKYLKDKLPEQ 592
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele12g0637 592 ProSiteProfiles Leucine-rich repeat profile. 216 237 IPR001611 GO:0005515
Lele12g0637 592 ProSiteProfiles Leucine-rich repeat profile. 413 434 IPR001611 GO:0005515
Lele12g0637 592 FunFam Leucine-rich repeat-containing protein 40 480 588 - -
Lele12g0637 592 Gene3D Ribonuclease Inhibitor 183 279 IPR032675 -
Lele12g0637 592 Gene3D Ribonuclease Inhibitor 475 588 IPR032675 -
Lele12g0637 592 Gene3D Ribonuclease Inhibitor 280 336 IPR032675 -
Lele12g0637 592 SMART LRR_typ_2 122 144 IPR003591 -
Lele12g0637 592 SMART LRR_typ_2 554 576 IPR003591 -
Lele12g0637 592 SMART LRR_typ_2 506 528 IPR003591 -
Lele12g0637 592 SMART LRR_typ_2 75 96 IPR003591 -
Lele12g0637 592 SMART LRR_typ_2 98 121 IPR003591 -
Lele12g0637 592 SMART LRR_typ_2 284 304 IPR003591 -
Lele12g0637 592 SMART LRR_typ_2 529 552 IPR003591 -
Lele12g0637 592 SMART LRR_typ_2 305 328 IPR003591 -
Lele12g0637 592 SMART LRR_typ_2 260 283 IPR003591 -
Lele12g0637 592 SMART LRR_typ_2 483 505 IPR003591 -
Lele12g0637 592 SMART LRR_typ_2 435 458 IPR003591 -
Lele12g0637 592 SMART LRR_typ_2 411 434 IPR003591 -
Lele12g0637 592 SMART LRR_typ_2 167 190 IPR003591 -
Lele12g0637 592 SMART LRR_typ_2 214 237 IPR003591 -
Lele12g0637 592 PRINTS Leucine-rich repeat signature 285 298 - -
Lele12g0637 592 PRINTS Leucine-rich repeat signature 506 519 - -
Lele12g0637 592 SMART LRR_bac_2 506 525 - -
Lele12g0637 592 SMART LRR_bac_2 193 210 - -
Lele12g0637 592 SMART LRR_bac_2 237 256 - -
Lele12g0637 592 SMART LRR_bac_2 167 186 - -
Lele12g0637 592 SMART LRR_bac_2 529 549 - -
Lele12g0637 592 SMART LRR_bac_2 282 301 - -
Lele12g0637 592 SMART LRR_bac_2 98 117 - -
Lele12g0637 592 SMART LRR_bac_2 75 94 - -
Lele12g0637 592 SMART LRR_bac_2 121 140 - -
Lele12g0637 592 SMART LRR_bac_2 214 233 - -
Lele12g0637 592 Gene3D Ribonuclease Inhibitor 4 182 IPR032675 -
Lele12g0637 592 Pfam Leucine rich repeat 55 111 IPR001611 GO:0005515
Lele12g0637 592 Pfam Leucine rich repeat 169 227 IPR001611 GO:0005515
Lele12g0637 592 Pfam Leucine rich repeat 262 318 IPR001611 GO:0005515
Lele12g0637 592 Pfam Leucine rich repeat 507 566 IPR001611 GO:0005515
Lele12g0637 592 Pfam Leucine rich repeat 437 493 IPR001611 GO:0005515
Lele12g0637 592 Gene3D Ribonuclease Inhibitor 337 474 IPR032675 -
Lele12g0637 592 ProSiteProfiles Leucine-rich repeat profile. 77 98 IPR001611 GO:0005515
Lele12g0637 592 ProSiteProfiles Leucine-rich repeat profile. 508 530 IPR001611 GO:0005515
Lele12g0637 592 ProSiteProfiles Leucine-rich repeat profile. 531 552 IPR001611 GO:0005515
Lele12g0637 592 PANTHER - 153 320 - -
Lele12g0637 592 ProSiteProfiles Leucine-rich repeat profile. 123 144 IPR001611 GO:0005515
Lele12g0637 592 SUPERFAMILY L domain-like 369 571 - -
Lele12g0637 592 SUPERFAMILY L domain-like 53 325 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele12g0637 Lele-ChrLele12 14730750 14739999 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele12g0637 154 566 Receptor kinase-like Gene Family AT4G08850 29.551 2.76e-18 87.4
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele12g0637 12 14730750 14739999 Lele12g0637 12 14730750 14739999 ECH
Lele09g0690 09 5236811 5244473 Lele12g0637 12 14730750 14739999 hybridization
Lele10g0629 10 4640777 4647279 Lele12g0637 12 14730750 14739999 hybridization