Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele10g0629 ATGGATCGGCTGCTAAAAGCTACAAGAGCATCCGGTTCCCTTAACCTCTCAAATCGCTCCCTCAGGGAAGTTCCAAATGAGGTGTACCGGAATCTGGAGGGTGGTGGTGGTGATAATAAGTGGTGGGAGGCCGTGGATCTCCAAAAGGTCATCTTGGCTCATAATGATATTGAATCATTAAAGGAAGATCTTAGAAACTTAATTTCACTAACTGTGTTGAACGTTAGCCACAACAGACTCTCTGAGATTCCAGCTGCAATAGGAGAGCTACCTCAGCTAAAGTTGTTAGATGTTTCGTTCAATTTGATAAATAAAATACCAGAGGAAATTGGATCGGCAGCATCACTTGTTAAGCTTGATTTCTCTAACAATCAACTGAAGGAGCTTCCGAGCTCACTTGGCCAATGTATGGAATTGTCAGAATTGAAGGGATCAAACAACCTCATTGCCAGCTTACCAGATGATTTAGCAAATTGTTCAAAATTGACAAAGCTAGACATGGAGGGAAACAAACTAACAGCGATACCTGAAAACCTCATTTCTTCATGGACTAAGCTTACTGAATTGAATGCATCAAAAAACTTGCTGAATGGCATACCAGCCAGCATTGGAGGTCTTTCTCATCTAATTCGACTTGACCTCCATCAGAACAGAATCTCATCAATCCCTTCATCAATCATGGGTTGCCATTCACTTGCAGAGTTTTATTTGGGGAATAACAACCTTTCTGCTGTACCAGCGGAGATAGGGACACTCTCACGTCTAGGGACTTTAGATCTTCACTCTAACCAGTTGAAGGAGTATCCAGTAGAGGCATGCAAGTTGGGTCTTTTAGTCTTAGATCTTTCAAACAATTCATTGAGTGGCTTACCTGCTGAATTGGGCAAGATGACTACCTTGAGGAAACTTTTGCTTACGGGCAATCCTTTGCGGACCCTTCGAAGCTCATTAGTCTTTGGACCTACGCCAGCACTACTGAAGTTTCTTCAAAGTAGACTTTCTGAGAGTGAAGAGTCTCAATCTACAATCAGTACAAAAGAGGATGTAATTGCAAAGGCTACTATATTGTCCATCACTTCAAAGGAACTTTCTTTGGAAGGGATGGGGTTGAGTGCCGTTCCAGCAGAAATATGGGAATCAGGGGAGATAATAAAAGTTGATCTTTCAAGGAATTCCATTGAGGAGTTGCCAGTGGAGCTCTCCTCTTGTGTTTCCCTCCAGACCCTGATTTTATCTAAGAACAAAATTAAAGATTGGCCTGGTTCAATTCTTAAATCACTTTCAAGTCTTTCTTCTTTGAAGCTGGACAACAATTCCCTGAGACAGATTCCTTCAGATGGTTTCAAAACTGTGCCTATGCTTCAGATTATTGATCTAAGTGGTAATGCAGCTTCACTGCCAAATAGTCCTGCATTCTCTAGCATGCCACATCTGCAAGAGCTTTACCTGAGAAGAATGCAACTAAGTGAAGCCCCCTCAGATGTATTGGTGCTATCTCAACTGCGAATCCTTGACTTGAGTCAAAATTCCCTTCAATCAGTCCCATCGGGGTTCAAAAATCTCACTTCTCTCGTGGAGCTTGACCTATCTAATAATAACATCTCCGTCCTTCCACCTGAACTGGGTTTGCTGGAATCAAGCCTTCAAGCATTGAGACTTGATGGAAATCCTCTCAGAAGCATCCGGAGGACTATCTTGGATAAAGGAACGAAAGCTGTTCTGAAATATTTGAAGGACAAATTGCCAGAGCAATAG 1755 0.4222 MDRLLKATRASGSLNLSNRSLREVPNEVYRNLEGGGGDNKWWEAVDLQKVILAHNDIESLKEDLRNLISLTVLNVSHNRLSEIPAAIGELPQLKLLDVSFNLINKIPEEIGSAASLVKLDFSNNQLKELPSSLGQCMELSELKGSNNLIASLPDDLANCSKLTKLDMEGNKLTAIPENLISSWTKLTELNASKNLLNGIPASIGGLSHLIRLDLHQNRISSIPSSIMGCHSLAEFYLGNNNLSAVPAEIGTLSRLGTLDLHSNQLKEYPVEACKLGLLVLDLSNNSLSGLPAELGKMTTLRKLLLTGNPLRTLRSSLVFGPTPALLKFLQSRLSESEESQSTISTKEDVIAKATILSITSKELSLEGMGLSAVPAEIWESGEIIKVDLSRNSIEELPVELSSCVSLQTLILSKNKIKDWPGSILKSLSSLSSLKLDNNSLRQIPSDGFKTVPMLQIIDLSGNAASLPNSPAFSSMPHLQELYLRRMQLSEAPSDVLVLSQLRILDLSQNSLQSVPSGFKNLTSLVELDLSNNNISVLPPELGLLESSLQALRLDGNPLRSIRRTILDKGTKAVLKYLKDKLPEQ 584
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele10g0629 584 ProSiteProfiles Leucine-rich repeat profile. 115 136 IPR001611 GO:0005515
Lele10g0629 584 SUPERFAMILY L domain-like 45 325 - -
Lele10g0629 584 ProSiteProfiles Leucine-rich repeat profile. 523 544 IPR001611 GO:0005515
Lele10g0629 584 Gene3D Ribonuclease Inhibitor 175 275 IPR032675 -
Lele10g0629 584 Gene3D Ribonuclease Inhibitor 467 580 IPR032675 -
Lele10g0629 584 Gene3D Ribonuclease Inhibitor 276 327 IPR032675 -
Lele10g0629 584 PANTHER - 145 312 - -
Lele10g0629 584 PRINTS Leucine-rich repeat signature 498 511 - -
Lele10g0629 584 PRINTS Leucine-rich repeat signature 277 290 - -
Lele10g0629 584 Gene3D Ribonuclease Inhibitor 328 466 IPR032675 -
Lele10g0629 584 SUPERFAMILY L domain-like 361 563 - -
Lele10g0629 584 ProSiteProfiles Leucine-rich repeat profile. 208 229 IPR001611 GO:0005515
Lele10g0629 584 ProSiteProfiles Leucine-rich repeat profile. 69 90 IPR001611 GO:0005515
Lele10g0629 584 ProSiteProfiles Leucine-rich repeat profile. 405 426 IPR001611 GO:0005515
Lele10g0629 584 SMART LRR_typ_2 427 450 IPR003591 -
Lele10g0629 584 SMART LRR_typ_2 90 113 IPR003591 -
Lele10g0629 584 SMART LRR_typ_2 521 544 IPR003591 -
Lele10g0629 584 SMART LRR_typ_2 159 182 IPR003591 -
Lele10g0629 584 SMART LRR_typ_2 252 275 IPR003591 -
Lele10g0629 584 SMART LRR_typ_2 381 403 IPR003591 -
Lele10g0629 584 SMART LRR_typ_2 404 426 IPR003591 -
Lele10g0629 584 SMART LRR_typ_2 114 136 IPR003591 -
Lele10g0629 584 SMART LRR_typ_2 297 320 IPR003591 -
Lele10g0629 584 SMART LRR_typ_2 67 88 IPR003591 -
Lele10g0629 584 SMART LRR_typ_2 206 229 IPR003591 -
Lele10g0629 584 SMART LRR_typ_2 498 520 IPR003591 -
Lele10g0629 584 SMART LRR_typ_2 546 568 IPR003591 -
Lele10g0629 584 SMART LRR_typ_2 276 296 IPR003591 -
Lele10g0629 584 SMART LRR_bac_2 206 225 - -
Lele10g0629 584 SMART LRR_bac_2 427 446 - -
Lele10g0629 584 SMART LRR_bac_2 67 86 - -
Lele10g0629 584 SMART LRR_bac_2 274 293 - -
Lele10g0629 584 SMART LRR_bac_2 498 517 - -
Lele10g0629 584 SMART LRR_bac_2 521 541 - -
Lele10g0629 584 SMART LRR_bac_2 90 109 - -
Lele10g0629 584 SMART LRR_bac_2 185 202 - -
Lele10g0629 584 SMART LRR_bac_2 159 178 - -
Lele10g0629 584 SMART LRR_bac_2 113 132 - -
Lele10g0629 584 Gene3D Ribonuclease Inhibitor 1 174 IPR032675 -
Lele10g0629 584 FunFam Leucine-rich repeat-containing protein 40 472 580 - -
Lele10g0629 584 ProSiteProfiles Leucine-rich repeat profile. 500 521 IPR001611 GO:0005515
Lele10g0629 584 Pfam Leucine rich repeat 499 558 IPR001611 GO:0005515
Lele10g0629 584 Pfam Leucine rich repeat 185 242 IPR001611 GO:0005515
Lele10g0629 584 Pfam Leucine rich repeat 47 103 IPR001611 GO:0005515
Lele10g0629 584 Pfam Leucine rich repeat 429 485 IPR001611 GO:0005515
Lele10g0629 584 Pfam Leucine rich repeat 254 310 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele10g0629 Lele-ChrLele10 4640777 4647279 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele10g0629 41 541 Receptor kinase-like Gene Family AT4G08850 29.433 5.10e-34 136
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele10g0629 10 4640777 4647279 Lele10g0629 10 4640777 4647279 ECH
Lele10g0629 10 4640777 4647279 Lele11g0700 11 6642957 6650661 hybridization
Lele10g0629 10 4640777 4647279 Lele12g0637 12 14730750 14739999 hybridization