Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele12g0628 ATGTCAGAATCTGATCCACCTCTTTCCTGTGGACGCCATCTCACGCCTACATTCCTCCCCAAATCATCAGAAGCTGCGCTTCACTGCTGTGTACAGCACCGCGTTAACTTAGACTCCCTAGGCCAAGACCATTTACGTGGACGATTCAAAAATCATGAACTTGTTGTTAGCGTCAAAGTAGTCCACGGGTCAGGCTCAGACTTAGCTTCCTCCCAACTCAACCGTTCGGCTATGGCTTCCGTCCACAGCACCATAGCTCCCCAGAGCTTCGTGCCTCTTTCCAAAGCAAAATCCAAATCCAAACCTCAAACAAGATCACTGCCCACGTCGAATTTTCTGGGCTCAAAGATTTCCCATAATTCAGTTTTCTCGCGAAACAATCCGTCGCGAAACTGGGTCGCCGTTAACTCGTCGGTGGAAGAGTTGGACGTGATTCCCGTACAAAGTAGTGATAGCACGGACCAGCAAGAAGGCATGGTGGCGGCAAGTCGGATCGAAATGGAAGGCGGAGAGGGGGAATTGGCGACTCAGGTGAGTGGTTTTGGAGCCAATGACGGGGTTTTTTCGTTCGAAGGAGCGAGTGAATATCAGGGGTTTTCTTCTGCTTCGGCTTCGGTTGGGGATGAAAGCCGGAGGGAGAGCGAGGAGGAGATTGAGAAGCTAATGGATAGGACCATCAATGCCACTATTGTGCTTGCGGCGGGTACTTTTGCCATAACCAAGCTTCTCACCATCGATAGCGATTCCTGGCATGGATGGACGCTTTTTGAGATCCTAAGATATGCACCGCAGCACAACTGGTCCGCTTATGAGGAAGCTCTCAAGACAAATCCGGTTTTTGCCAAAATGGTGATCAGTGGAGTTGTATACTCTGTAGGGGACTGGATTGCACAGTGCTTTGAAGGAAAACCTCTTTTTGAATTTGATCGTGCTCGAATGTTCAGATCGGGTCTTGTTGGTTTTACTCTACACGGCTCTCTTTCGCATTACTATTATCAGTTTTGTGAGGCCCTATTTCCATTCCAAGATTGGTGGGTAGTTCCGGCCAAAGTTGCCTTCGACCAAACTGCATGGTCAGCCGTTTGGAACACCATTTATTATGTAGCTGTTGGATTTCTGCGCCTTGATTCTCCAATCAATGTTTTTAGTGAATTGAAGGCAACATTTATTCCTATGTTGACTGCAGGGTGGAAGCTTTGGCCATTTGCCCATCTCATTACTTATGGTATGATCCCAGTGGAGCAAAGACTTCTTTGGGTGGATTGTGTGGAGCTTATATGGGTGACAATACTTTCAACCTACTCGAATGAAAAATCAGAAGCAAGACACTCAGAGTTGCCTGCAGAAGTGAAAGCCACTGCTTCATCCACGAATCCTCCAGAGGAGTAA 1389 0.478 MSESDPPLSCGRHLTPTFLPKSSEAALHCCVQHRVNLDSLGQDHLRGRFKNHELVVSVKVVHGSGSDLASSQLNRSAMASVHSTIAPQSFVPLSKAKSKSKPQTRSLPTSNFLGSKISHNSVFSRNNPSRNWVAVNSSVEELDVIPVQSSDSTDQQEGMVAASRIEMEGGEGELATQVSGFGANDGVFSFEGASEYQGFSSASASVGDESRRESEEEIEKLMDRTINATIVLAAGTFAITKLLTIDSDSWHGWTLFEILRYAPQHNWSAYEEALKTNPVFAKMVISGVVYSVGDWIAQCFEGKPLFEFDRARMFRSGLVGFTLHGSLSHYYYQFCEALFPFQDWWVVPAKVAFDQTAWSAVWNTIYYVAVGFLRLDSPINVFSELKATFIPMLTAGWKLWPFAHLITYGMIPVEQRLLWVDCVELIWVTILSTYSNEKSEARHSELPAEVKATASSTNPPEE 462
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele12g0628 462 MobiDBLite consensus disorder prediction 441 462 - -
Lele12g0628 462 Pfam Mpv17 / PMP22 family 372 432 IPR007248 GO:0016020
Lele12g0628 462 PANTHER PEROXISOMAL MEMBRANE PROTEIN 2, PXMP2 MPV17 266 433 IPR007248 GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele12g0628 Lele-ChrLele12 14641639 14644744 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele12g0628 270 440 Miscellaneous Gene Families AT2G14860 27.485 5.28e-15 72.8
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele12g0628 12 14641639 14644744 Lele12g0628 12 14641639 14644744 ECH
Lele09g0702 09 5330700 5333938 Lele12g0628 12 14641639 14644744 hybridization
Lele10g0639 10 4732763 4735560 Lele12g0628 12 14641639 14644744 hybridization