Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele09g0702 ATGTGGACGCCATTTCGCGCCTACATTCTTCACCAATCATCAGAAGCCGAACTTCTCCGAACGCAGTGGTCAGCCTTAGACTTAGCTTCCTCCCAACTCAGCGGCTCGGCTATGGCTTCCGTCCACAGCACCATTGCTCCCCAGAGCTTCGTGCCTCTTTCCAAAGCAAAATCCATATCCAAACTTCAAGCAAGATCACTTCCCACGTCGAATTTTCTTGGCTCGAAGATTTCCCAGAATTTAGTTTCCTCCCAAAACAAACCGTCACGAAACTGGGTCGTCGGCAACTCGACGGGGGAGGAGTTGGACGTGATACCCGTACAAAGTAGTGATAGTACGGACCAGCAAGAAGGCATGGCGGTGGCGAGTCGGATCGAAATGGAAGGCGGAGAGGGGGAATTGGCGACTCAGGTGAGTGGGTTTGGAGCCAATGACGGGGTTTTTTCGTTCGAAGGAGCGGGTGAGTTTCAGGGATTTTCTTCTGCTTCGTCTTCAGTTGGGGATGAAAGCCGGGGGGAGAGCGAGGAGGAGATGGAGAAGCTAATAGATAGGACTATCAATGCCACTATTGTGCTTGTGGCGGGTACTTTTGCCATCACCAAGCTTCTCACCATTGATAGCGATTACTGGCATGGATGGACGCTTTTTGAGATACTAAGATATGCACCGCAGCACAACTGGTCCGCTTATGAGGAAGCTCTCAAGACAAATCCTGTTTTTGCCAAAATGGTGATCAGTGGAGTTGTATACTCTATTGGAGACTGGATTGCACAGTGCTTTGAAGGAAAACCTCTTTTTGAATTTGATCGTGCGCGAATGTTCAGATCGGGTCTTGTTGGTTTTACTCTACATGGCTCTCTTTCTCATTATTATTATCAGTTTTCTGAGGTGCTATTTCCATTCCAAGATTGGTGGGTAGTTCCTGCCAAAGTTGCTTTCGACCAAACTGCATGGTCAGCCGTTTGGAACACCATTTATTATGTAGCTGTTGGTTTTCTGCGCCTTGATTCTCCAATCAATGTTTTTAATGAATTGAAGGCAACATTTATTCCTATGTTGACTGCAGGGTGGAAGCTTTGGCCATTTGCCCATCTCATTACTTATGGTGTGATCCCAGTGGAGCAAAGACTTCTTTGGGTGGATTGTGTGGAGCTTATATGGGTGACAATACTTTCAACCTACTCAAATGAAAAATCAGAAGCAAGACAATCAGAGTTACCTGCAGAAGTGAAAACCACTGCTTCATCCTCGAATTCTCCAGAGTGTAATCCTTGCTTATGTTTATCAGGAGTAACCCAAGGAGATATGAACAGAGGCAGGAATAGGGGAAGATTTGTTCAGCTCAATAAGATATTGGAAGTAGAGAAGCCTGCAAGATGCTGGATCTTGAATTGA 1395 0.4624 MWTPFRAYILHQSSEAELLRTQWSALDLASSQLSGSAMASVHSTIAPQSFVPLSKAKSISKLQARSLPTSNFLGSKISQNLVSSQNKPSRNWVVGNSTGEELDVIPVQSSDSTDQQEGMAVASRIEMEGGEGELATQVSGFGANDGVFSFEGAGEFQGFSSASSSVGDESRGESEEEMEKLIDRTINATIVLVAGTFAITKLLTIDSDYWHGWTLFEILRYAPQHNWSAYEEALKTNPVFAKMVISGVVYSIGDWIAQCFEGKPLFEFDRARMFRSGLVGFTLHGSLSHYYYQFSEVLFPFQDWWVVPAKVAFDQTAWSAVWNTIYYVAVGFLRLDSPINVFNELKATFIPMLTAGWKLWPFAHLITYGVIPVEQRLLWVDCVELIWVTILSTYSNEKSEARQSELPAEVKTTASSSNSPECNPCLCLSGVTQGDMNRGRNRGRFVQLNKILEVEKPARCWILN 464
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele09g0702 464 PANTHER PEROXISOMAL MEMBRANE PROTEIN 2, PXMP2 MPV17 226 393 IPR007248 GO:0016020
Lele09g0702 464 MobiDBLite consensus disorder prediction 159 178 - -
Lele09g0702 464 Pfam Mpv17 / PMP22 family 332 392 IPR007248 GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele09g0702 Lele-ChrLele09 5330700 5333938 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele09g0702 230 400 Miscellaneous Gene Families AT2G14860 27.485 2.33e-14 71.2
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele09g0702 09 5330700 5333938 Lele09g0702 09 5330700 5333938 ECH
Lele09g0702 09 5330700 5333938 Lele11g0710 11 6735916 6738287 hybridization
Lele09g0702 09 5330700 5333938 Lele12g0628 12 14641639 14644744 hybridization