Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele10g0639 ATGGCTTCCGTCCACAGCACTATAGCTCCTCAGAGCTTCGTGCCTCTTTTCAAAGCAAAATCCAAAGCTAAACCTCAAACAAGATCACTGCCCACGTCGAATTTTCTGGGCTCAAAGATTTCCCAGAATTCAGTTTTCTCGCGAAACAATCCGTCGCGAAACTGGGCCGCCGTTAACTCGTCGGTGGAGGAGTTGGACGTGATACCCGTACAAAGTAGCGATAGCACGGACCAGCAAGAAGGCATGGCGGTGGCGAGTCGGATCGAAATGGAAGGCGGAGAGGGGGAATTGGCGAATCAGGTGAGTGGTTTTGGAGCCAATGACGGGGTTTTTTCGTTCGAAGGAGCGGGTGAGTTTCAGGGGTTTTCTTCTGCTTCGGCTTCGGTTGGGAATGAAAGCCGGGGGGAGAGCGAGGAGGAGATGGAGAAGCTAATGGATAGGACCATCAATTCCACTATTGTGCTTGCGGCGGGTACTTTTGCCATCACCAAGCTTCTCACCATCGATAGCGATTACTGGCATGGATGGACGCTTTTTGAGATCCTTAGATATGCCCCGCAGCACAACTGGTCCGCTTATGAGGAAGCTCTCAAGACAAATCCGGTTTTTGCCAAAATGGTGATCAGTGGAGTTGTATACTCTGTAGGGGACTGGATTGCACAGTGCTTTGAAGGAAAACCTCTTTTTGAATTTGATCGTGCACGAATGTTCAGATCGGGTCTTGTTGGTTTTACTCTACATGGCTCTCTTTCTCATTACTATTATCAGTTTTGTGAGGCGCTATTTCCATTCCAAGATTGGTGGGTAGTTCCTGCCAAAGTTGTCTTCGACCAAACTGCATGGTCAGCCGTTTGGAACACCATTTATTATGTAGCTGTTGGATTTCTGCGCCTTGATTCTCCAATCAATGTTTTTAGTGAATTGAAGGCAACATTTATTCCCATGTTGACTGCAGGGTGGAAGCTTTGGCCATTTGCCCATCTCATTACTTATGGTGTGATCCCAGTGGAGCAAAGACTTCTTTGGGTGGATTGTGTGGAGCTTATATGGGTGACAATACTTTCAACCTACTCGAATGAAAAATCAGAAGCAAGACACTCAGAGTTACCTACAGAAGTGAAAGCCACTGCTTCATCTGCGAATCCTACGAAGGAGTAA 1158 0.4732 MASVHSTIAPQSFVPLFKAKSKAKPQTRSLPTSNFLGSKISQNSVFSRNNPSRNWAAVNSSVEELDVIPVQSSDSTDQQEGMAVASRIEMEGGEGELANQVSGFGANDGVFSFEGAGEFQGFSSASASVGNESRGESEEEMEKLMDRTINSTIVLAAGTFAITKLLTIDSDYWHGWTLFEILRYAPQHNWSAYEEALKTNPVFAKMVISGVVYSVGDWIAQCFEGKPLFEFDRARMFRSGLVGFTLHGSLSHYYYQFCEALFPFQDWWVVPAKVVFDQTAWSAVWNTIYYVAVGFLRLDSPINVFSELKATFIPMLTAGWKLWPFAHLITYGVIPVEQRLLWVDCVELIWVTILSTYSNEKSEARHSELPTEVKATASSANPTKE 385
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele10g0639 385 MobiDBLite consensus disorder prediction 365 385 - -
Lele10g0639 385 Pfam Mpv17 / PMP22 family 295 355 IPR007248 GO:0016020
Lele10g0639 385 PANTHER PEROXISOMAL MEMBRANE PROTEIN 2, PXMP2 MPV17 189 356 IPR007248 GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele10g0639 Lele-ChrLele10 4732763 4735560 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele10g0639 193 363 Miscellaneous Gene Families AT2G14860 26.901 8.21e-15 72.0
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele10g0639 10 4732763 4735560 Lele10g0639 10 4732763 4735560 ECH
Lele10g0639 10 4732763 4735560 Lele11g0710 11 6735916 6738287 hybridization
Lele10g0639 10 4732763 4735560 Lele12g0628 12 14641639 14644744 hybridization