Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele12g0594 ATGCATGAAGCTCCCTTAGACACCAACCTCTCTCAGCGCAACAAGAAAGCTCTTCAGTTCATTGAGGATGTCACCACCAACGCCGATCAACTCCAGAACAAGGTCCTCTCTCAAATTCTCTCCCGTAATGCCAACGTGGAGTACTTGCAGAGACACGGCCTCCATGGCCGTACCGACCGCCAAACCTTCAAGAAACTCCTTCCCGTCGTCACCTACGACCATATCCAACCAGACGTCAACCGCATCGCCAATGGCGACATCTCTCCTATCCTTTGCTCCGATCCCATTTCCGAGTTCCTCACCAGCTCTGGTACGTCTGGTGGGGAGAGAAAACTGATGCCAACAATTGAAGAAGAAAGAGAAAGAAGGAGTTCCCTTTATAGCTTGTTGATGCCTGTTATGAACCAGTTCGTTCCTGGCCTGGAAAAAGGCAAAGGAATGTACTTTTATTTCATAAAATCTGAAGCGAAAACACCAGGAGGGCTTTTAGCTAGTCCCGTTCTCACTAGTTATTACAAAAGCTCTCATTTTAAAAACAGATCAATTACCGATCCCTACGCTAACTATACCAGTCCCATTGAAACCATCCTTTGTCCTGATTCTTACCAGAGCATGTATTCCCAGTTGCTCTGTGGTCTCTGCCAAAACGATGTCGTACTTCGGGTTGGTGCTGTTTTCGCCTCCGGCTTCATCCGGGTAATTCGATTCCTTGAGAAACACTGGGCCCTTCTTTGCAACGACATTAGAACAGGAACACTTAATCCCCAGATCACAGACACTTCCGTGCGAGATTCTGTCATGAAGATACTTAAACCCGACCGGAATCTCGCGGGTTTTATCGAGTCTGAGTGTAGGAAAAACTGTTGGCAGGGGATTATTCCCAGGTTGTGGCCCTACACTAAGTATGTCGATGTTATTGTCACAGGGACGATGTCACAGTACATTCCCACACTGGATTACTACTCCAATGGGCTCCCACTTGTCTGCACCATGTACGCCTCCAGCGAGTGCTACTTCGGACTCAATCTTAACCCTCTCTGCAAACCCAGCGAGGTCTCTTACACCCTTATCCCCACCATGGCCTACTTTGAATTCCTTCCTGTTAAGAGAATCAATGAACTGACTGATTCTCTTCAAACCAATGAACAACAAGAGTTAGTCGACCTCGTCGATGTTAAGCTCGGACAAGAATATGAGCTTGTTGTCACAACCTTCGCCGGGTTATATAGGTACAAAGTGGGAGATGTTCTGAGAGTGGCTGGATTCAAGAACAAGGCACCGCGGTTCAACTTCATATGCAGGAAGAACGTGGTTTTGAGCATTGATGCAGATAAAACAGATGAAGTTGAGCTTCAGTACGCAATGAAGAATGCTGTTACCCATTTGGCTCCGTTTGATGCAGCCGTTTCTGAGTACACAAGCTACGCAGATACAAAGACAATCCCAGGGCACTATGTGTTGTACTGGGAACTCAACCTGAACGGGTCAACTCCGATTCCTGCGTCTGTGTACGAGGATTGCTGTTTAACGATTGAAGAATCTCTCAACAGTGTGTACCGTCAAGGACGTGTGTCGGACGAATCGATTGGGCCACTTGAGATTAAGATTGTGGAACAGGGGACGTTTGATAAACTTATGGATTATGCTATAAGCTTAGGAGCATCCATGAATCAGTACAAGACACCGAGGTGTGTCAAATTTGCACCTGTTGTGGAGCTGTTGAACTCGAGGGTAGTGGGAAGCTACTTTAGTCCTAAATGTCCCAAAATGTGCTTAGCCATTGTAAATAGCAGCAAGTTATTGACTTTTTACTCTTTTGCAGTAATCGTCATCCCTGTTTCGTTAGAATTGAATTCTTAA 1860 0.4618 MHEAPLDTNLSQRNKKALQFIEDVTTNADQLQNKVLSQILSRNANVEYLQRHGLHGRTDRQTFKKLLPVVTYDHIQPDVNRIANGDISPILCSDPISEFLTSSGTSGGERKLMPTIEEERERRSSLYSLLMPVMNQFVPGLEKGKGMYFYFIKSEAKTPGGLLASPVLTSYYKSSHFKNRSITDPYANYTSPIETILCPDSYQSMYSQLLCGLCQNDVVLRVGAVFASGFIRVIRFLEKHWALLCNDIRTGTLNPQITDTSVRDSVMKILKPDRNLAGFIESECRKNCWQGIIPRLWPYTKYVDVIVTGTMSQYIPTLDYYSNGLPLVCTMYASSECYFGLNLNPLCKPSEVSYTLIPTMAYFEFLPVKRINELTDSLQTNEQQELVDLVDVKLGQEYELVVTTFAGLYRYKVGDVLRVAGFKNKAPRFNFICRKNVVLSIDADKTDEVELQYAMKNAVTHLAPFDAAVSEYTSYADTKTIPGHYVLYWELNLNGSTPIPASVYEDCCLTIEESLNSVYRQGRVSDESIGPLEIKIVEQGTFDKLMDYAISLGASMNQYKTPRCVKFAPVVELLNSRVVGSYFSPKCPKMCLAIVNSSKLLTFYSFAVIVIPVSLELNS 619
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele12g0594 619 Pfam GH3 auxin-responsive promoter 21 566 IPR004993 -
Lele12g0594 619 PANTHER GH3 DOMAIN-CONTAINING PROTEIN 14 587 IPR004993 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele12g0594 Lele-ChrLele12 14346994 14349223 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele12g0594 6 584 EF-hand Containing Proteins AT1G23160 49.660 0.0 576
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele12g0594 12 14346994 14349223 Lele12g0594 12 14346994 14349223 ECH
Lele09g0736 09 5593964 5595960 Lele12g0594 12 14346994 14349223 hybridization
Lele10g0674 10 5052403 5054399 Lele12g0594 12 14346994 14349223 hybridization