Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele09g0736 ATGCCTGAAGCTACCTTAGACACCAACATCTCTGAGCTCAACAAGAAAGCTCTTCAGTTCATTGAGGATGTCACAACCAACGCCGATCAACTCCAGAACAAGGTCCTCTCTCAAATTCTCTCCCGTAATGCCAACGTCGAGTACTTGCAGAGACACGGACTCCATGGCCGTACCGACCGCCAAACCTTCAAGAAACTCGTCCCCGTCATCACATACGACCATATCCAACCCGACGTCAACCGCATCGCCAATGGCGACACTTCTCCTATCCTTTCCTCCCATCCCATCTCTGAGTTCCTCACCAGCTCTGGGACATCTGGTGGGGAGAGAAAACTGATGCCTACAATTGAAGAAGATGGAGAAAGAAGGAGATTGCTTTATAGCTTGTTGATGCCTGTGATGAACCTGTTCGTTCCTGGCCTTGAAAAGGGCAAAGGAATGTACTTTTACTTCATAAAATCTGAAGCTAAAACACCGGGAGGGCTTTTAGCTCGTCCCGTTCTTACGAGTTATTACAAAAGTTCTCATTTTAAGAACATATCACTTACCGATCCTTACGTCAAGTATACCAGTCCCATTGAAACCATCCTTTGTCCTGATTCTTACCAGAGCATGTATTCTCAATTGCTCTGTGGTCTCTGTCAAAACGATGTCGTCCTTCGTGTTGGTGCTGTTTTCGCCTCTGCCTTCATTCGGGGAATTCGCTTCCTTGAGAAACACTGGGCCCTTCTCTGCAAAGACATTAGAACAGGAACACTTAACCCCCAGATTACAGACACTTCCGTGCGAGATTCTGTCATGAAGATACTGAAACCCGACCAGAATCTCGCCGACTTTATCGAATCTGAGTGTAGAAAGAACTGTTGGCAGGGGATCATCCCCAGGTTGTGGCCCAACACTAAGTATGTTGATGTTATTGTAACAGGGACGATGTCACAGTACATTCCCACACTGGATTACTACTCCAATGGCCTCCCACTTGTCTGCACCATGTATGCTTCGAGCGAGTGCTACTTCGGACTTAATCTTAACCCTCTCTGCAAACCCAGCGATGTCTCTTACACCCTCATCCCCACCATGGCCTACTTCGAGTTCCTTCCTGTTAACAGAAGCAATGGACTCACTGATTCTCTTCATCCCAATGAACAGCAGGAGTTAGTCGACCTCATCGATGTTAAACTCGGCCAAGAATACGAGCTCGTCGTTACAACCTTAGCCGGGTTATATAGGTACAAAGTGGGAGATGTTCTGAGAGTGGCTGGATTCAAGAACAAGGCACCGCAGTTCAACTTCATTTGCAGGAAGAACGTGGTTTTGAGCATTGATTCAGATAAAACAGATGAAGTTGAGCTTCAGTACGCGATAAAGAATGCCGTGACGCATTTGGCACCGTTCGATGCGGCTGTGGCTGAGTACACAAGCTATGCAGATACAAAGACCATCCCAGGGCACTATGTGTTATACTGGGAACTCAACCTCAACGGGACAACTCCGATTCCAGCGTCTGTGTACGAGGATTGCTGTTTAACCATTGAAGAATCTCTCAACAGTGTGTACCGTCAAGGACGTGTGTCGGACAAATCGATTGGGCCACTTGAGATTAAGGTTGTGGAACAGGGGACGTTTGATAAACTTATGGATTATGCTATAAGCTTAGGAGCATCCATGAATCAGTACAAGACACCAAGGTGTGTCAAATTTGCACCTGTTGTGGAGCTGTTGAATTCAAGGGTAGTGGCAAACTACTTTAGTCCTAAATGTCCCAAGTGGGTTCCAGGACATAAGCTATGGATCAATCAGAATTAA 1806 0.4651 MPEATLDTNISELNKKALQFIEDVTTNADQLQNKVLSQILSRNANVEYLQRHGLHGRTDRQTFKKLVPVITYDHIQPDVNRIANGDTSPILSSHPISEFLTSSGTSGGERKLMPTIEEDGERRRLLYSLLMPVMNLFVPGLEKGKGMYFYFIKSEAKTPGGLLARPVLTSYYKSSHFKNISLTDPYVKYTSPIETILCPDSYQSMYSQLLCGLCQNDVVLRVGAVFASAFIRGIRFLEKHWALLCKDIRTGTLNPQITDTSVRDSVMKILKPDQNLADFIESECRKNCWQGIIPRLWPNTKYVDVIVTGTMSQYIPTLDYYSNGLPLVCTMYASSECYFGLNLNPLCKPSDVSYTLIPTMAYFEFLPVNRSNGLTDSLHPNEQQELVDLIDVKLGQEYELVVTTLAGLYRYKVGDVLRVAGFKNKAPQFNFICRKNVVLSIDSDKTDEVELQYAIKNAVTHLAPFDAAVAEYTSYADTKTIPGHYVLYWELNLNGTTPIPASVYEDCCLTIEESLNSVYRQGRVSDKSIGPLEIKVVEQGTFDKLMDYAISLGASMNQYKTPRCVKFAPVVELLNSRVVANYFSPKCPKWVPGHKLWINQN 601
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele09g0736 601 Pfam GH3 auxin-responsive promoter 21 566 IPR004993 -
Lele09g0736 601 PANTHER GH3 DOMAIN-CONTAINING PROTEIN 15 587 IPR004993 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele09g0736 Lele-ChrLele09 5593964 5595960 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele09g0736 5 584 EF-hand Containing Proteins AT1G23160 50.255 0.0 580
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele09g0736 09 5593964 5595960 Lele09g0736 09 5593964 5595960 ECH
Lele09g0736 09 5593964 5595960 Lele11g0741 11 7029111 7031192 hybridization
Lele09g0736 09 5593964 5595960 Lele12g0594 12 14346994 14349223 hybridization