Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele10g0674 ATGCCTGAAGCTCCCTTAGACACCAACCTCTCTGAGCGCAACAAAAAAGCTCTTCAGTTCATTGAGGATGTCACCACCCACGCCGATCAACTCCAGAACAAGGTCCTCTCTCAAATTCTCTCCCGTAATGCCAACGTCGAGTACTTGCAGAGACACGGCCTCCATGGCCGTACCGACCGCCAAACCTTCAAGAAACTCCTTCCCGTCGTCACCTACGACCATATCCAACCCTACGTCAACCGCATCGCCAATGGCGACATCTCTCCTATCCTTTGCTCCGATCCCATTTCCGAGTTCCTCACCAGCTCTGGTACGTCTGGTGGGGAGAGAAAACTGATGCCAACAATTGAAGAAGAAAGAGAAAGAAGGAGTTCCCTTTATAGCTTATTGATGCCTGTTATGAACCAGTTCGTTCCTGGCCTGGAAAAAGGCAAAGGAATGTACTTGTATTTCATAAAATCTGAAGCTAAAACCCCAGGAGGGCTTTTAGCCAGTCCCGTTCTCACTAGTTATTACAAAAGCTCTCATTTTAAAAACAGATCACTTACCGATCCCTACGCTAACTATACCAGTCCCATTGAAACCATCCTTTGTCCTGATTCTTACCAGGGCATGTATTCCCAGTTGCTCTGTGGTCTCTGCCAAAACGATGTCGTACTTCGAGTTGGTGCTGTGTTCGCCTCCGGCTTCATCCGGGTAATTCGATTCCTTGAGAAACACTGGGCCCTTCTTTGCAACGACATTAGAACAGGAACACTTAACCCCCAGATCACAGACACTTCCGTGCGAGATTCTGTCATGAAGATACTTAAACCCGACCGGAGTCTCGCGGATTTTATCGAGTCTGAGTGTAGGAAAAACTGTTGGCAGGGGATTATTCCCAGGTTGTGGCCCTACACTAAGTATGTCGATGTTATTGTAACAGGGACGATGTCACAGTACATTCCCACACTGGATTACTACTCCAATGGCCTCCCACTTGTCTGCACCATGTACGCCTCCAGCGAGTGCTACTTCGGACTCAATCTTAACCCTCTCTGCAAACCCAGCGAGGTTTCTTACACCCTCATCCCCACCATGGCCTACTTTGAATTCCTTCCTGTTAACAGAACCAATGGACTCACTGATTCTCTTCAAACCAATGAACAACAAGAGTTAGTCGACCTCATCGATGTTAAGCTCGGACAAGAATACGAGCTCGTCGTCACAACCTTCGCCGGGTTATATAGGTACAAAGTGGGAGATGTTCTGAGAGTGGCTGGATTCAAGAACAAGGCACCGCAGTTCAACTTCATATGCCGGAAGAACGTGGTTTTGAGCATTGATGCAGATAAAACAGATGAAGTTGAGCTTCAGTACGCAATGAAGAATGCTGTTACCCATTTGGCTCCGTTTGATGCAGCCGTTTCTGAGTACACAAGCTACGCAGATACAAAGACAATCCCAGGGCACTATGTGTTGTACTGGGAACTCAACCTGAACGGGTCAACTCCGATTCCTGCGTCTGTGTACGAGGATTGCTGTTTAACGATTGAAGAATCTCTCAACAGTGTGTACCGTCAAGGACGTGTGTCGGACGAATCGATTGGGCCACTTGAGATTAAGATTGTGGAACAGGGGACGTTTGATAAACTTATGGATTATGCTATAAGCTTAGGAGCATCCATGAATCAGTACAAGACACCGAGGTGTGTCAAATTTGCACCTGTTGTGGAGCTGTTGAACTCGAGGGTAGTGGGAAGATACTTTAGTCCTAAATGTCCCAAGTGGGTTCCGGGACATAAGCTTTGGATCAATCAGAATTAA 1806 0.4718 MPEAPLDTNLSERNKKALQFIEDVTTHADQLQNKVLSQILSRNANVEYLQRHGLHGRTDRQTFKKLLPVVTYDHIQPYVNRIANGDISPILCSDPISEFLTSSGTSGGERKLMPTIEEERERRSSLYSLLMPVMNQFVPGLEKGKGMYLYFIKSEAKTPGGLLASPVLTSYYKSSHFKNRSLTDPYANYTSPIETILCPDSYQGMYSQLLCGLCQNDVVLRVGAVFASGFIRVIRFLEKHWALLCNDIRTGTLNPQITDTSVRDSVMKILKPDRSLADFIESECRKNCWQGIIPRLWPYTKYVDVIVTGTMSQYIPTLDYYSNGLPLVCTMYASSECYFGLNLNPLCKPSEVSYTLIPTMAYFEFLPVNRTNGLTDSLQTNEQQELVDLIDVKLGQEYELVVTTFAGLYRYKVGDVLRVAGFKNKAPQFNFICRKNVVLSIDADKTDEVELQYAMKNAVTHLAPFDAAVSEYTSYADTKTIPGHYVLYWELNLNGSTPIPASVYEDCCLTIEESLNSVYRQGRVSDESIGPLEIKIVEQGTFDKLMDYAISLGASMNQYKTPRCVKFAPVVELLNSRVVGRYFSPKCPKWVPGHKLWINQN 601
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele10g0674 601 Pfam GH3 auxin-responsive promoter 21 566 IPR004993 -
Lele10g0674 601 PANTHER GH3 DOMAIN-CONTAINING PROTEIN 14 587 IPR004993 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele10g0674 Lele-ChrLele10 5052403 5054399 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele10g0674 6 584 EF-hand Containing Proteins AT1G23160 50.000 0.0 579
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele10g0674 10 5052403 5054399 Lele10g0674 10 5052403 5054399 ECH
Lele10g0674 10 5052403 5054399 Lele11g0741 11 7029111 7031192 hybridization
Lele10g0674 10 5052403 5054399 Lele12g0594 12 14346994 14349223 hybridization