Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele12g0566 ATGAATGATGATCAAAAACCGCAGCAAGCAGGCGGTGTTCGGCCCGGTCGAACCAATGGGTTTTTTCCCAACTCGCTCCGGGCTATCTCCAGCTACCTCAGGGTCGTTTCCTCAGGTGCTTCCAACATCGCGCGTTCGGCAGCATCAGTTACGTCCTCGATTGTGGATAGGGATGATGACGCCAGTTCTGATCAGGTCATCTGGGCTGGTTTTGATAAATTAGAGGGTGAGGGAGAAGTCACTCGTCAAGTTCTACTTCTAGGATTTCAGTCCGGCTTCCAGGTTTGGGATGTTGAAGATTCACATAATGTACACGACCTGGTTTCCAGACATGATGGTCCTGTTTCTTTTATGCAAATGTTGCCAAATCCAATTGCATCAAAGAGATCAGCAGAAAAGTTTGCAAACAGCCGCCCACTGCTAGCTGTATGTGCTGATGGTTTCTTTGCTGGAGGCAGTAACGTTCAGGATGGACTTGCCACCCCTTACAATGGGAGCACTTCCAATTTCCATGGGCAATCAAGTGGAAATTATCTGCCAACGACTGTGCAGTTTTTTTCAATGAGATCCCAATCATATGTCCATGCACTAAAATTTAGATCAGTTGTACATACCGTAAGGTGCAGTTCTCGAATAGTTGCTGTTTCTCAATCAACTCAGATACACTGTTTTGATGCTGCAACATTAGAAAGAGAGTGTACTTTACTTACCAATACTATAGTTGTAAGTTGTCCTGGTTCTGGAGGTGTAGGCTATGGACCACTTGCAGTGGGTTCAAGATGGCTTGCTTATAGTGGAAGTCCAGTCACAATATCCAATTCTGGGCATGTTAATCCACAAGACTTGACAACTTCAGCAAGCTTTCCTGGTTTTTCTACAAATGGGAGCTTGGTTGCACATTATGCCAAAGAATCAAGCAAGCAACTTGCTTCTGGGATTGTGTCCTTTGGAGATATGGGGTATAAGAAACTTTCCAGATACTACTCTGAGCTTCGGTCTGATAGCGATAGTTCATCACGATCTGTAAATTCAGGTTGGAAGGGCAATGGAACCATTAATGGACATTCAGCATATGCTGACAACATTGGAATGGTCATTGTAAGGGATATTGTCAGTAAAAATGTAGTTACTCAACTGCGAGCCCACAAAAGTCCTATTTCAGCCTTACGCTTTGATCCCAGTGGAACCATTTTGGTGACTGCTTCGGTTCAGGGGCATAATATAAATGTATACAAGATAATGCCTTGTAACTCAGAGGCACCTGATGCTGGCCCTTCTAATGTTCATCTCTACAAGTTGCAACGTGGCTATACTAATGCAATAATACAAGATATTAGTTTCAGTGATGAGAGCAATTGGATTATGATAAGTTCCTCTAGGGGCACTACCCATCTATTTGCTATAAATCCTCAGGGTGGATCTGTGAACATTCAGGCCCTTGATTGTAGTATTCCAATACAAAATAACGGATTGGGCTGTATTACTAATCAAGGAGTCATCTATCCTCATAGTTCAGCCTTGCAAATGCATAAAAAGCAGAGCCTCTGTGCAGCTGGCCCACCAATCACTCTTTCTGTTGTTAGCAGAATTAGGAATGGAACTAATGGTTGGAGAGGCACGGTGAGCGTTGCTGCTACAGCTGCCACAGGAAAGACGAGTTCCCTTTCTGGGGCTATTGCTTCATCTTTCTGTAACTGCAATGGTAGTGGCATATATATTGATGGGAAGAATTCCAAGACAAAGTATCACTTGTTGGTTTTTTCATCCTCTGGTTCTATGATACAATATGCTTTACAGATGTTAAATGGTCGAGATTCAGCTATTGTGTCTGGATTAAACCCTGCTTATGAATTACATCCACAAGTTGATGCGAGATTAGCAGTGGAAGCTATTCAGAAATGGAATATATGTCAAAGACTAAGTTTGAGGGATCAAGAAGATAACGTTGACATATATGGTGATAATGGAATTCCTGATGGCAATAAAATTTATCCTGAAGAAATGAAAGAGGACACTATCAGTAGCCCAAAATTCAAGAATGAAGTTGTGAAAGCAAATTCCTCTTCAGAGGAAGATTGTCATCTGTATATTTCCCAAGCTGAACTGCAGATGCACCAAGCTCAGACTCCATTGTGGGCAAAGTCTGAGATGTATTTTCATTCAATGGTGAAAGAAGCTACCATAATAGATGAAGCAGCTGCTGCAGGAGGGGAATTTGAGATTGAAAGGATTCCAACTCGCATGATTCAAGCTAGGTCAAAAGACTTAATTCCTGTTTTTGACTTTCTTCAGACCCCAAAAGCCCAACAAACAAGGGTAAATGAACATTTGTTGCGTCAGAGTACTGGGATGTCTGAAAATGGCAAGATTTCAGACTATACAACAAACTCTACCGAATTGGACAATGGCATTCAAAGAAGGCCTGCTAATGGGGAATCACATTGA 2445 0.4229 MNDDQKPQQAGGVRPGRTNGFFPNSLRAISSYLRVVSSGASNIARSAASVTSSIVDRDDDASSDQVIWAGFDKLEGEGEVTRQVLLLGFQSGFQVWDVEDSHNVHDLVSRHDGPVSFMQMLPNPIASKRSAEKFANSRPLLAVCADGFFAGGSNVQDGLATPYNGSTSNFHGQSSGNYLPTTVQFFSMRSQSYVHALKFRSVVHTVRCSSRIVAVSQSTQIHCFDAATLERECTLLTNTIVVSCPGSGGVGYGPLAVGSRWLAYSGSPVTISNSGHVNPQDLTTSASFPGFSTNGSLVAHYAKESSKQLASGIVSFGDMGYKKLSRYYSELRSDSDSSSRSVNSGWKGNGTINGHSAYADNIGMVIVRDIVSKNVVTQLRAHKSPISALRFDPSGTILVTASVQGHNINVYKIMPCNSEAPDAGPSNVHLYKLQRGYTNAIIQDISFSDESNWIMISSSRGTTHLFAINPQGGSVNIQALDCSIPIQNNGLGCITNQGVIYPHSSALQMHKKQSLCAAGPPITLSVVSRIRNGTNGWRGTVSVAATAATGKTSSLSGAIASSFCNCNGSGIYIDGKNSKTKYHLLVFSSSGSMIQYALQMLNGRDSAIVSGLNPAYELHPQVDARLAVEAIQKWNICQRLSLRDQEDNVDIYGDNGIPDGNKIYPEEMKEDTISSPKFKNEVVKANSSSEEDCHLYISQAELQMHQAQTPLWAKSEMYFHSMVKEATIIDEAAAAGGEFEIERIPTRMIQARSKDLIPVFDFLQTPKAQQTRVNEHLLRQSTGMSENGKISDYTTNSTELDNGIQRRPANGESH 814
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele12g0566 814 Gene3D - 81 494 IPR015943 GO:0005515
Lele12g0566 814 SUPERFAMILY WD40 repeat-like 83 469 IPR036322 GO:0005515
Lele12g0566 814 SMART WD40_4 190 225 IPR001680 GO:0005515
Lele12g0566 814 SMART WD40_4 372 412 IPR001680 GO:0005515
Lele12g0566 814 SMART WD40_4 426 467 IPR001680 GO:0005515
Lele12g0566 814 MobiDBLite consensus disorder prediction 778 814 - -
Lele12g0566 814 Pfam Breast carcinoma amplified sequence 3 519 758 IPR022175 -
Lele12g0566 814 PANTHER BREAST CARCINOMA AMPLIFIED SEQUENCE 3 14 790 IPR045142 GO:0006914
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele12g0566 Lele-ChrLele12 14109627 14114893 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele12g0566 12 14109627 14114893 Lele12g0566 12 14109627 14114893 ECH
Lele09g0770 09 6046777 6052097 Lele12g0566 12 14109627 14114893 hybridization
Lele10g0699 10 5278404 5283670 Lele12g0566 12 14109627 14114893 hybridization