Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele10g0699 ATGAATGATGATCAGAAACCGCAGCAAGCACGCGGTGTTGGGTCCGGTCGAACCAATGGGTTTTTTCCCAGCTCGCTCCGGGCTATCTCCAGCTACCTCAGGGTCGTTTCCTCCGGTGCTTCCAACATAGCGCGTTCGGCAGCATCAGTTGCGTCCTCGATTGTGGATAGGGATGATGACGCCAGTTCTGATCAGGTCATCTGGACTGGTTTTGATAAATTAGAGGGTGAGGGAGAAGTCACTCGTCAAGTTCTACTTCTAGGATTTCGGTCCGGCTTCCAGGTTTGGGATGTTGAAGATTCACATAATGTACATGACCTGGTTTCCAGACATGATGGTCCTGTTTCTTTTATGCAAATGTTGCCAAATCCAATTGCATCAGAGAGATCAGCAGAAAAGTTTGCAAACAGCCGCCCTCTGCTAGCTGTATGTGCTGATGGTTTCTTTGCTGGAGGCAGTAACGTTCAGGATGGACTGGCCACCCCTTATAATGGGAGCACTTCCAATTTCCATGGGCACTCAAATGGAAATTATCTGCCAACAACTGTGCAGTTTTTTTCTATGAGATCCCAATCATATGTCCATGCATTAAAATTTAGATCAGTTGTATATTCTGTAAGGTGCAGTTCTCGAATAGTTGCTGTTTCTCAGTCAACTCAGATACACTGTTTTGATGCTGCAACATTAGTAAGAGAGTATACTTTACTTACCAATACTATAGTTGTAAGTTGTCCTGGTTCTGGAGGTGTAGGCTATGGACCACTTGCAGTGGGTTCAAGATGGCTTGCTTATAGTGGAAGTCCAGTTACAATATCCAATTCTGGGCATGTTAATCCACAAGACTTGACAACTTCAGCAAGCTTTCCTGGTTTTTCTTCAAATGGGAGCTTGGTTTCACACTATGCCAAAGAATCAAGCAAGCAACTTGCTTCTGGGATTGTGTCCCTTGGAGATATGGGGTATAAGAAACTTTCCAGATACTACTCTGAGCTTCGGTCTGATAGAGATAGCTCGTCACGATCTGTAAATTCAGGTTGGAAGGGCAATGGAACCGTTAATGGACATTCAGCAGATGCTGACAACATTGGAATGGTTATTGTAAGGGATATTGTCAGTAAAAATGTAGTCACTCAACTGCGAGCCCACAAAAGTCCTATTTCAGCCTTACGCTTTGATCCCAGTGGAACCATTTTGGTGACTGCTTCGGTTCAGGGGCATAATATAAATGTATATAAGATAATGCCTTGTTACTCAGAGGCACCTGATGCTGGCCCTTCTAATGTTCATCTCTACAGGTTGCAACGTGGCTATACTAATGCGATAATACAAGATATTAGTTTCAGTGATGACAGCAATTGGATTATGATAAGTTCCTCTAGGGGCACTACCCATCTATTTGCTATAAATCCTCAGGGTGGATCTGTGAACATTCAAGCCCTTGATTGTAGTCTTCCAACACAAAATAATGAATTGGGCGGTATTACTAATCAAGGAGTCCTCTATCCTCATAGTTCAGCCTTGCAAATGCATAAAAAGCAGAGCCTGTGTGCAACTGGCCCACCAATCACTCTTTCTGTTGTTAGCAGAATTAGGAATGGAACTAATGGTTGGAGAGGCACTGTGAGCGTTGCTGCTACAGCTGCCACAGGAAAGACGAGTTCCCTTTCTGGGGCTATTGCTTCAGCTTTCTGTAACTGCAAGGGTAGTGGCATATATATTGATGGGAAGAATTCCAAGACAAAGTATCACTTGTTGGTTTTTTCATCCTTTGGTTCTATGATACAATATGCTCTACAGATGTTAAATGGTCGAGATTCGGCTATTTTTTCTGGATTAAACCCTGCTTATGAATCACATCCACAAGTTGATGCAAGATTAGCAGTGGAAGCTATTCAGAAATGGAATATATGTCAAAGACTAAGTTTGCGGGATCGAGAAGATAATGTTGACTTATATGGTGATAATGGAATTCCTGATGGCAATAAAATTTATCCTGAAGAATTGAAGGAGGACACTATCAGTAGCCCAAAATTCAAGAATGAAGTTGTGAAAGCAAATTCCTCTTCAGAGGAAGATCGTCATCTGTATATTTCCCAAGCTGAACTGCAGATGCACCAAGCTCAGACTCCATTGTGGGCAAAGTCTGAGATGTATTTTCATTCAATGGTGAAAGAAGCGTCCATAATAGATGAAGCAGCTGCTGCAGGAGGGGAATTTGAGATTGAAAGGATTCCAACTCGTATGATTCAAGCTAGGTCAAAAGACTTAATTCCTGTTTTTGACTTTCTTCAGACCCCAAAAGCCCAACAAACAAGGGCTTATGTTCTGGATGGCAGGGTAAATGAACATTTGTTGCATCAGAGTACTGGGATGTCTGAAAATGGCAAGATTTCAGACTATACAACAAAATCTACTGAATTGGACGATGGCATTCAAGTACCTGGGTTGGATGATCATCTTCTGCCAACAAACACAAGAGGCTATGTAAATAAAAATAGCTCCCCCAAGCCAAATACTCAGGTTGAGATTGTAAATAATAGGTTAGAGCACTTAAGCGTGGAAGGTCAACTCAAGTTTGTAAATAGTGACAGAGAAGGCCTGCTAATGGGGAATCACATTGAAGATTAA 2628 0.4228 MNDDQKPQQARGVGSGRTNGFFPSSLRAISSYLRVVSSGASNIARSAASVASSIVDRDDDASSDQVIWTGFDKLEGEGEVTRQVLLLGFRSGFQVWDVEDSHNVHDLVSRHDGPVSFMQMLPNPIASERSAEKFANSRPLLAVCADGFFAGGSNVQDGLATPYNGSTSNFHGHSNGNYLPTTVQFFSMRSQSYVHALKFRSVVYSVRCSSRIVAVSQSTQIHCFDAATLVREYTLLTNTIVVSCPGSGGVGYGPLAVGSRWLAYSGSPVTISNSGHVNPQDLTTSASFPGFSSNGSLVSHYAKESSKQLASGIVSLGDMGYKKLSRYYSELRSDRDSSSRSVNSGWKGNGTVNGHSADADNIGMVIVRDIVSKNVVTQLRAHKSPISALRFDPSGTILVTASVQGHNINVYKIMPCYSEAPDAGPSNVHLYRLQRGYTNAIIQDISFSDDSNWIMISSSRGTTHLFAINPQGGSVNIQALDCSLPTQNNELGGITNQGVLYPHSSALQMHKKQSLCATGPPITLSVVSRIRNGTNGWRGTVSVAATAATGKTSSLSGAIASAFCNCKGSGIYIDGKNSKTKYHLLVFSSFGSMIQYALQMLNGRDSAIFSGLNPAYESHPQVDARLAVEAIQKWNICQRLSLRDREDNVDLYGDNGIPDGNKIYPEELKEDTISSPKFKNEVVKANSSSEEDRHLYISQAELQMHQAQTPLWAKSEMYFHSMVKEASIIDEAAAAGGEFEIERIPTRMIQARSKDLIPVFDFLQTPKAQQTRAYVLDGRVNEHLLHQSTGMSENGKISDYTTKSTELDDGIQVPGLDDHLLPTNTRGYVNKNSSPKPNTQVEIVNNRLEHLSVEGQLKFVNSDREGLLMGNHIED 875
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele10g0699 875 SUPERFAMILY WD40 repeat-like 84 469 IPR036322 GO:0005515
Lele10g0699 875 PANTHER BREAST CARCINOMA AMPLIFIED SEQUENCE 3 15 789 IPR045142 GO:0006914
Lele10g0699 875 Gene3D - 79 519 IPR015943 GO:0005515
Lele10g0699 875 Pfam Breast carcinoma amplified sequence 3 519 758 IPR022175 -
Lele10g0699 875 Pfam WD domain, G-beta repeat 376 405 IPR001680 GO:0005515
Lele10g0699 875 SMART WD40_4 426 467 IPR001680 GO:0005515
Lele10g0699 875 SMART WD40_4 190 225 IPR001680 GO:0005515
Lele10g0699 875 SMART WD40_4 372 412 IPR001680 GO:0005515
Lele10g0699 875 FunFam Breast carcinoma-amplified sequence 3 291 519 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele10g0699 Lele-ChrLele10 5278404 5283670 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele10g0699 10 5278404 5283670 Lele10g0699 10 5278404 5283670 ECH
Lele10g0699 10 5278404 5283670 Lele11g0772 11 7782658 7789730 hybridization
Lele10g0699 10 5278404 5283670 Lele12g0566 12 14109627 14114893 hybridization