Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele12g0292 ATGGAGGTTCCGTCTCATTTGAAGCTTTCCCTTCTTGTGTGCATGATATTGTTTTCAACATCTCAGATTCAAGCTACAAGTGTCAAATACTGCGACAAGAAAGAAGACTATGCTGTGAGGGTCAATGGAGTTGAAATATCACCCAGCCCTGTGGTTAGGGGAAAACCGGCTACCTTTAAGATTTCAGCTGCCACTGGTGGAGCTATTTCTGGTGGGAAATTAATAATTGAAGTTTCATACTTTGGGGTGCATGTCCATACAGAAACTCATGATCTTTGTGAGGAAGCATCTTGTCCTGTCACTGCAGGAAACTTTGTGCTCGCTCACACTCAAACACTACCTTCATTTACCCCACCGGGCTCTTATGTACTGAAGATGACGATGGAGGATGAGAAGAATGAGCCATTAACTTGTGTCACCTTTAATTTCAAAATTGGTCTTGGATCTTCAGTGTCCGACATCTAA 465 0.428 MEVPSHLKLSLLVCMILFSTSQIQATSVKYCDKKEDYAVRVNGVEISPSPVVRGKPATFKISAATGGAISGGKLIIEVSYFGVHVHTETHDLCEEASCPVTAGNFVLAHTQTLPSFTPPGSYVLKMTMEDEKNEPLTCVTFNFKIGLGSSVSDI 154
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele12g0292 154 Pfam ML domain 26 145 IPR003172 -
Lele12g0292 154 SMART pgtp_13 28 143 IPR003172 -
Lele12g0292 154 PANTHER NIEMANN PICK TYPE C2 PROTEIN NPC2-RELATED 7 145 IPR039670 GO:0015918|GO:0032934
Lele12g0292 154 SUPERFAMILY E set domains 25 145 IPR014756 -
Lele12g0292 154 Gene3D - 26 146 - -
Lele12g0292 154 CDD PG-PI_TP 28 143 IPR033917 GO:0032366
Lele12g0292 154 FunFam putative phosphatidylglycerol/phosphatidylinositol transfer protein DDB_G0282179 26 147 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele12g0292 Lele-ChrLele12 2615916 2618784 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele32g0380 32 2360621 2362905 Lele12g0292 12 2615916 2618784 CCT
Lele09g1032 09 19504431 19508246 Lele12g0292 12 2615916 2618784 hybridization
Lele10g0985 10 21166352 21170342 Lele12g0292 12 2615916 2618784 hybridization