Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele09g1032 ATGGAGCCAGTGAAGACGGCGGGAGTACTGCTGGTGCTGGAAGATGCTCTGCCCAACAAGAACCGACCGCCTCCATGGGTCGCGGTGAAGGGAGGAGGGAGGATTTTTGTGAGGTTGAACGAAGGCAATCGGAGGGCCAAAGGTGAAGTGACAGCTGTGCAAGATGGAGACGGTCTCCTTCCCGTCCACCACACTAGGCGATCCATGGAGGTTCCGTCTCATTTGAAGCTTTCCCTTCTTTTATGCTTCCTTTTGCTTTCAGCATCGCAGATTCAAGCCACAAGTGTCAAATACTGCGACAAGAAAGGAGACTATGCTGTGAAGGTGAATGAAGTGGAGATATTACCTAACCCTGTGGTTAGGGGAAAACCGGCTACCTTTAAGATTTCAGCTGCTACTGGTGGAGCTATTTCTGGCGGAAAGTTAGTAATTGAAGTTTCATACTTTGGGGTGCATGTCCATACAGAGACTCATGATCTTTGTGAGGAAGCATCCTGTCCTGTCACTGCAGGAAACTTTGTGCTTGCTCACACTCAAACACTACCGTCATTTACCCCACCGGGCTCTTATATACTGAAGATGACGATGGAGGATGAGAAGAATGAGCCGTTGACTTGTGTCACCTTTAATTTCAAAATCGGCCTTGGATCTTCAGTGTCCGACATCTAA 669 0.4858 MEPVKTAGVLLVLEDALPNKNRPPPWVAVKGGGRIFVRLNEGNRRAKGEVTAVQDGDGLLPVHHTRRSMEVPSHLKLSLLLCFLLLSASQIQATSVKYCDKKGDYAVKVNEVEILPNPVVRGKPATFKISAATGGAISGGKLVIEVSYFGVHVHTETHDLCEEASCPVTAGNFVLAHTQTLPSFTPPGSYILKMTMEDEKNEPLTCVTFNFKIGLGSSVSDI 222
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele09g1032 222 SUPERFAMILY E set domains 93 213 IPR014756 -
Lele09g1032 222 Gene3D - 94 214 - -
Lele09g1032 222 CDD PG-PI_TP 96 211 IPR033917 GO:0032366
Lele09g1032 222 Pfam ML domain 94 213 IPR003172 -
Lele09g1032 222 FunFam putative phosphatidylglycerol/phosphatidylinositol transfer protein DDB_G0282179 94 215 - -
Lele09g1032 222 PANTHER NIEMANN PICK TYPE C2 PROTEIN NPC2-RELATED 77 213 IPR039670 GO:0015918|GO:0032934
Lele09g1032 222 SMART pgtp_13 96 211 IPR003172 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele09g1032 Lele-ChrLele09 19504431 19508246 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele32g0380 32 2360621 2362905 Lele09g1032 09 19504431 19508246 CCT
Lele09g1032 09 19504431 19508246 Lele11g1034 11 17531941 17536090 hybridization
Lele09g1032 09 19504431 19508246 Lele12g0292 12 2615916 2618784 hybridization