Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele10g0985 ATGGCAGCCTTAAACATCATCAAGAGAACAGCTAAGGACTTGTTTGAAATCGCAATAGACCCATTCCAAAGAAGAACACATCACACTCAAGTTAAGCGAGACGGTATCCTTCCTGTCTACCACACTAGGCGATCCATGGAGGTTCCGTCTCATTTTAAGCTTTCCCTTCTTGTGTGCATGCTATTGCTTTCATCATCTCAGATTCAAGCTACAAGTGTCAAATACTGCGACAAGAAAGAAGACTATGCTGTGAAGGTGAATGGAGTTGAAATATCACCCAGCCCTGTGGTTAGGGGAAAACCGGCTACCTTTAAGATTTCAGCTGCTACTGGTGGAGCTATTTCTGGCGGAAAGTTAATAATTGAAGTCTCATACTTTGGGGTGCATGTCCATACAGAAACTCATGATCTTTGTGAGGAAGCATCTTGTCCTGTCACTGCAGGAAACTTTGTGCTCGCTCACACTCAAACACTACCTTCATTTACCCCACCGGGCTCTTATGTACTGAAGATGACGATGGAGGATGAGAAGAATGAGCTGTTAACTTGTGTCACCTTTAATTTCAAAATCGGTCTTGGATCTTCAGTATCCGACATCTAA 600 0.4333 MAALNIIKRTAKDLFEIAIDPFQRRTHHTQVKRDGILPVYHTRRSMEVPSHFKLSLLVCMLLLSSSQIQATSVKYCDKKEDYAVKVNGVEISPSPVVRGKPATFKISAATGGAISGGKLIIEVSYFGVHVHTETHDLCEEASCPVTAGNFVLAHTQTLPSFTPPGSYVLKMTMEDEKNELLTCVTFNFKIGLGSSVSDI 199
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele10g0985 199 Pfam ML domain 71 190 IPR003172 -
Lele10g0985 199 SMART pgtp_13 73 188 IPR003172 -
Lele10g0985 199 FunFam putative phosphatidylglycerol/phosphatidylinositol transfer protein DDB_G0282179 71 192 - -
Lele10g0985 199 SUPERFAMILY E set domains 70 190 IPR014756 -
Lele10g0985 199 CDD PG-PI_TP 73 188 IPR033917 GO:0032366
Lele10g0985 199 Gene3D - 71 191 - -
Lele10g0985 199 PANTHER NIEMANN PICK TYPE C2 PROTEIN NPC2-RELATED 53 190 IPR039670 GO:0015918|GO:0032934
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele10g0985 Lele-ChrLele10 21166352 21170342 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele32g0380 32 2360621 2362905 Lele10g0985 10 21166352 21170342 CCT
Lele10g0985 10 21166352 21170342 Lele11g1034 11 17531941 17536090 hybridization
Lele10g0985 10 21166352 21170342 Lele12g0292 12 2615916 2618784 hybridization