Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele12g0065 ATGTCATGGGATGCTAGAGGTTGCAGCGAGATGGGTAGTCCCAAGAAGAATGAAAACAAGGGATTTTTCGCTTCAATGAGTTCTAGCCTCTCCATTTTCAGCAACGCTATGCACCGATCCGTCAATGGGCTCTTAGGATATGAAGGGGTTGAAGTCATAAATCCTGAGGGAGGTAAAGATGATGCGGAGGAGGAAGCTCAGAGAGGAAGATGGAAAATGGAGGAAAGAGAGAGTTATTGGAAGATGATGCACAAATATATAGGGTCAGATGTAACATCGATGGTGACTCTTCCTGTTATTATTTTTGAGCCCATGACTATGCTTCAGAAGATGGCAGAGTACTCCTACTTGTTGGATCGGGCAGATGAATGTGAGGATCCTTGCATGCGACTGGTGTACGCCTCATCATGGGCTGTATCTGTGTACTTTGCATATCAACGAACCTGGAAGCCTTTTAATCCCATCCTAGGAGAGACTTGTGAAATGGTTAACCATGGTGGAGTTACATTTCTTGCAGAACAGGTGAGCCACCATCCTCCAATGAGCGCTGGGCATGCAGAGAACGAGCATTTTACATATGATGTGACTTCAAAGTTAAAAACTAAGTTTTTGGGAAACTCTGTTGATGTTTACCCTGTTGGAAGAACCCGTGTGACCCTCAAGAGGGATGGTGTAGTTTTAGATTTGGTTCCACCTCCTACAAAGGTCAACAACCTAATATTTGGCCGAACATGGGTCGATTCACCTGGAGAAATGATAATGACAAATTTGACTACTGGAGACAAAGTTGTGCTGTACTTTCAACCATGTGGATGGTTTGGAGCTGGTCGCTATGAAGTGGATGGATATGTTTATAATTCTGCTGAAAAGCCTAAAATATTAATGACAGGGAAGTGGAATGAATCGATGAGTTATCAACCTTGTGATTTGGAGGGAGAGCCTCTTCCAAATACAGAACTCCAAGAGGTTTGGCATGTTGCTGATGTTCCACAGAATGATAAATTCCAGTATACCTATTTTGCACACAAAATAAACAGCTTCGACACTGCCCCTGGCAAGTTGTTGGCATCAGACTCTCGTCTACGCCCAGATAGATATGCACTTGAGATGGGTGATTTATCCAAAGCCGGGGCAGAGAAAAGCAGTTTGGAGGAGAAGCAACGTGCGGAGAAGAGAACTCGAGAGGCTGAAGGGCATAACTTCACAGCAAGATGGTTTGATCTAACTGAAGAAGTGACATCTACCCCATGGGGTGATTTGGAAATCTACAAATATAATGGTAAATACACTGAACATCGGGTAGCTATAGATAGCTCAGGCAGCTCTGATGATGTTGATGTTAAATCAATAGAATTCGATCCATGGCAGTATGGTAATCAAGCCACAAACTGA 1392 0.4353 MSWDARGCSEMGSPKKNENKGFFASMSSSLSIFSNAMHRSVNGLLGYEGVEVINPEGGKDDAEEEAQRGRWKMEERESYWKMMHKYIGSDVTSMVTLPVIIFEPMTMLQKMAEYSYLLDRADECEDPCMRLVYASSWAVSVYFAYQRTWKPFNPILGETCEMVNHGGVTFLAEQVSHHPPMSAGHAENEHFTYDVTSKLKTKFLGNSVDVYPVGRTRVTLKRDGVVLDLVPPPTKVNNLIFGRTWVDSPGEMIMTNLTTGDKVVLYFQPCGWFGAGRYEVDGYVYNSAEKPKILMTGKWNESMSYQPCDLEGEPLPNTELQEVWHVADVPQNDKFQYTYFAHKINSFDTAPGKLLASDSRLRPDRYALEMGDLSKAGAEKSSLEEKQRAEKRTREAEGHNFTARWFDLTEEVTSTPWGDLEIYKYNGKYTEHRVAIDSSGSSDDVDVKSIEFDPWQYGNQATN 463
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele12g0065 463 FunFam Oxysterol-binding protein-related protein 3C 365 458 - -
Lele12g0065 463 FunFam oxysterol-binding protein-related protein 3C 157 334 - -
Lele12g0065 463 Pfam Oxysterol-binding protein 78 433 IPR000648 GO:0008289
Lele12g0065 463 ProSitePatterns Oxysterol-binding protein family signature. 173 184 IPR018494 -
Lele12g0065 463 Gene3D - 365 457 - -
Lele12g0065 463 SUPERFAMILY Oxysterol-binding protein-like 74 442 IPR037239 -
Lele12g0065 463 PANTHER OXYSTEROL-BINDING PROTEIN-RELATED 67 433 IPR000648 GO:0008289
Lele12g0065 463 MobiDBLite consensus disorder prediction 378 396 - -
Lele12g0065 463 Gene3D - 158 334 - -
Lele12g0065 463 MobiDBLite consensus disorder prediction 377 396 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele12g0065 Lele-ChrLele12 570288 575802 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele30g1281 30 15332311 15333582 Lele12g0065 12 570288 575802 CCT
Lele09g1255 09 21361081 21366084 Lele12g0065 12 570288 575802 hybridization
Lele10g1231 10 23386974 23392404 Lele12g0065 12 570288 575802 hybridization