Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele09g1255 ATGGGTAGCCCCAAGAAGAATGAAAACAAGGGATTTTTCGCTTCAATGAGTTCTAGCCTCTCCATTTTCGGCAACGCTATGCACCGATCCGTCAATGGACTGTTAGGATATGAAGGGGTTGAAGTGATAAATCCTGAGGGAGGTAAAGATGATACGGAGGAGGAAGCTCAAAGAGGAAGATGGAAGATGGAGGAAAGAGAGAGTTATTGGAAGATGATGCAAAAATATATAGGGTCAGATGTAACATCGATGGTGACTCTTCCTGTTATTATTTTTGAGCCCATGACTATGATTCAGAAGATAGCAGAGTTGATGGAGTACTCCTACTTGTTGGATCGGGCAGACGAATGTGAGGATCCTTACATGCAACTGGTGTACGCCTCATCATGGGCTGTATCTGTGTACTTTGCGTATCAACGAACCTGGAAGCCTTTTAATCCCATTCTAGGAGAGACTTATGAAATGGTTAACCATGATGGAATTACATTTCTTGCAGAACAGGTGAGCCACCATCCTCCAATGAGCGCTGGGCATGCAGAGAATGAGCATTTTACATATGATGTGACTTCAAAGTTAAAAACTAAGTTTTTGGGAAACTCTGTTGACGTTTACCCTGTTGGAAGAACCCGTGTGACCCTCAAGAGGGATGGTGTAGTTTTAGATTTGGTTCCACCTCCTACAAAGGTCAACAACCTAATATTTGGCCGGACTTGGGTCGATTCACCTGGAGAAATGATAATGACAAATTTGACTACTGGAGACAAAGTTGTGCTGTACTTTCAACCATGTGGATGGTTTGGAGCTGGTCGCTATGAAGTGGATGGATATGTTTATAATTCTGCTGAAGAGCCTAAAATATTAATGACAGGAAAGTGGAATGAATCGATGAGTTATCAACCTTGTGATTTGGAGGGAGAGCCTCTTCCAAATACAGAACTGCAAGAGGTTTGGCATGTTGCTGATGTTCCACAGAACGATAAATTCCAGTATACCTATTTTGCACACAAAATAAACAGCTTCGACACTGCCCCTCAGAAGTTGTTGGCATCAGACTCTCGTCTGCGCCCAGATAGATATGCACTTGAGATGGGTGATTTATCCAAAGCTGGGGCAGAGAAAAGCAGTTTGGAGGAGAGGCAACGTGCGGAGAAGAGAACTCGAGAGGCTGAAGGGCATAACTTCACACCAAGATGGTTTGATCTAACTGAAGAAGTGACATCTACCCCATGGGGTGATTTGGAAATCTACAAATATAATGGGAAATACACTGAACATCGGGTAGCTATAGATAGCTCAGACCGCTCTGATGATGTTGATGTTAAATCAATAGAATTCAATCCATGGCAGTATGGTAATCAAGCCACAAACTGA 1371 0.4296 MGSPKKNENKGFFASMSSSLSIFGNAMHRSVNGLLGYEGVEVINPEGGKDDTEEEAQRGRWKMEERESYWKMMQKYIGSDVTSMVTLPVIIFEPMTMIQKIAELMEYSYLLDRADECEDPYMQLVYASSWAVSVYFAYQRTWKPFNPILGETYEMVNHDGITFLAEQVSHHPPMSAGHAENEHFTYDVTSKLKTKFLGNSVDVYPVGRTRVTLKRDGVVLDLVPPPTKVNNLIFGRTWVDSPGEMIMTNLTTGDKVVLYFQPCGWFGAGRYEVDGYVYNSAEEPKILMTGKWNESMSYQPCDLEGEPLPNTELQEVWHVADVPQNDKFQYTYFAHKINSFDTAPQKLLASDSRLRPDRYALEMGDLSKAGAEKSSLEERQRAEKRTREAEGHNFTPRWFDLTEEVTSTPWGDLEIYKYNGKYTEHRVAIDSSDRSDDVDVKSIEFNPWQYGNQATN 456
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele09g1255 456 Gene3D - 150 327 - -
Lele09g1255 456 PANTHER OXYSTEROL-BINDING PROTEIN-RELATED 57 426 IPR000648 GO:0008289
Lele09g1255 456 MobiDBLite consensus disorder prediction 371 389 - -
Lele09g1255 456 MobiDBLite consensus disorder prediction 370 389 - -
Lele09g1255 456 FunFam Oxysterol-binding protein-related protein 3C 358 451 - -
Lele09g1255 456 SUPERFAMILY Oxysterol-binding protein-like 64 437 IPR037239 -
Lele09g1255 456 FunFam oxysterol-binding protein-related protein 3C 150 327 - -
Lele09g1255 456 ProSitePatterns Oxysterol-binding protein family signature. 166 177 IPR018494 -
Lele09g1255 456 Pfam Oxysterol-binding protein 68 426 IPR000648 GO:0008289
Lele09g1255 456 Gene3D - 358 452 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele09g1255 Lele-ChrLele09 21361081 21366084 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele30g1281 30 15332311 15333582 Lele09g1255 09 21361081 21366084 CCT
Lele09g1255 09 21361081 21366084 Lele11g1259 11 19544506 19549453 hybridization
Lele09g1255 09 21361081 21366084 Lele12g0065 12 570288 575802 hybridization