Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele11g1259 ATGAGTTCTAGCCTCTCCATTTTCAGCAACGCTATGCACCGATCCGTCAATGGACTGTTAGGATATGAAGGGGTTGAAGTGATAAATCCTGAGGGAGGTAAAGATGATGCGGAGGAGGAAGCTCAAAGAGGAAGATGGAAGACTGAGGAAAGAGAGAGTTATTGGAAGATGATGCAAAAATATATAGGGTCAGATGTAACATCGATGGTGACTCTTCCTGTTATTATTTTTGAGCCCATGACTATGATTCAGAAGATAGCAGAGTTGATGGAGTACTCCTACTTGTTGGATCGGGCAGACGAATGTGAGGATCCTTACATGCGACTGGCGTACGCCTCATCATGGGCTGTATCTGTGTACTTTGCGTATCAACGAACCTGGAAGCCTTTTAATCCCATTCTAGGAGAGACTTATGAAATGGTTAACCATGATGGAATTACATTTCTTGCAGAACAGGTGAGCCACCATCCTCCAATGAGCGCTGGGCATGCAGAGAATGAGCATTTTACGTATGATGTGACTTCAAAGTTAAAAACTAAGTTTTTGGGAAACTCTGTTGACGTTTACCCTGTTGGAAGAACCCGTGTGACCCTCAAGAGGGATGGTGTAGTTTTAGATTTGGTTCCACCTCCTACAAAGGTCAACAACCTAATATTTGGCCGGACTTGGGCCGATTCACCTGGAGAAATGATAATGACAAATTTGACAACTGGAGACAAAGTTGTGCTGTACTTTCAACCATGTGGATGGTTTGGAGCTGGTCGCTATGAAGTGGATGGATATGTTTATAATTCTGCTGAAGAGCCTAAAATATTAATGACAGGAAAGTGGAATGAATCGATGAGTTATCAACCTTGTGATTTGGAGGGAGAGCCTCTTCCAAATACAGAATTGCAAGAGGTTTGGCATGTTGCTGATGTTCCACAGAACGATAAATTCCAGTATACCTATTTTGCACACAAAATAAACAGCTTCGACACTGCCCCTCGGAAGTTGTTGGCATCAGACTCTCGTCTGCGCCCAGATAGATATGCACTTGAGATGGGTGATTTATCCAAAGCTGGGGCAGATAAAAGCAGTTTGGAGGAGAGGCAACGCGCGGAGAAGAGAACTCGAGAGGCTGAAGGGCATAACTTCACACCAAGATGGTTTGATCTAACTGCAGAAGTGACATCTACCCCATGGGGGGATTTGGAAATCTACAAATATAATGGGAAATACACTGAACATCGGGTAGCTATAGATAGCTCAGACAGCTCTGATGATGCTGATGTTAAATCAATAGAATTCAACCCATGGCAGTATGGTAATCAAGCCACAAACTGA 1326 0.4351 MSSSLSIFSNAMHRSVNGLLGYEGVEVINPEGGKDDAEEEAQRGRWKTEERESYWKMMQKYIGSDVTSMVTLPVIIFEPMTMIQKIAELMEYSYLLDRADECEDPYMRLAYASSWAVSVYFAYQRTWKPFNPILGETYEMVNHDGITFLAEQVSHHPPMSAGHAENEHFTYDVTSKLKTKFLGNSVDVYPVGRTRVTLKRDGVVLDLVPPPTKVNNLIFGRTWADSPGEMIMTNLTTGDKVVLYFQPCGWFGAGRYEVDGYVYNSAEEPKILMTGKWNESMSYQPCDLEGEPLPNTELQEVWHVADVPQNDKFQYTYFAHKINSFDTAPRKLLASDSRLRPDRYALEMGDLSKAGADKSSLEERQRAEKRTREAEGHNFTPRWFDLTAEVTSTPWGDLEIYKYNGKYTEHRVAIDSSDSSDDADVKSIEFNPWQYGNQATN 441
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele11g1259 441 FunFam Oxysterol-binding protein-related protein 3C 343 436 - -
Lele11g1259 441 Gene3D - 343 438 - -
Lele11g1259 441 ProSitePatterns Oxysterol-binding protein family signature. 151 162 IPR018494 -
Lele11g1259 441 FunFam oxysterol-binding protein-related protein 3C 135 312 - -
Lele11g1259 441 Gene3D - 135 312 - -
Lele11g1259 441 Pfam Oxysterol-binding protein 53 411 IPR000648 GO:0008289
Lele11g1259 441 MobiDBLite consensus disorder prediction 355 374 - -
Lele11g1259 441 PANTHER OXYSTEROL-BINDING PROTEIN-RELATED 43 411 IPR000648 GO:0008289
Lele11g1259 441 MobiDBLite consensus disorder prediction 356 374 - -
Lele11g1259 441 SUPERFAMILY Oxysterol-binding protein-like 48 421 IPR037239 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele11g1259 Lele-ChrLele11 19544506 19549453 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele30g1281 30 15332311 15333582 Lele11g1259 11 19544506 19549453 CCT
Lele09g1255 09 21361081 21366084 Lele11g1259 11 19544506 19549453 hybridization
Lele10g1231 10 23386974 23392404 Lele11g1259 11 19544506 19549453 hybridization