Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele30g1167 ATGGCGACCAGTAAGGGCTACTTCGCCAGACCAAGCTACCGTTTCCTCCCCGGGGACAGGGACAGAGACAGAGATTCCCCACCCATAGCTTCCGATTCCATCTTTGAATTCGACGAGTCTGACATTTACAAGTCGACTCGCAACAACTCGCCGGAGTTCCGCAAGCCCATTCACGCCTCCCGCATGGGCAGGAAATCGTCTTCGTCCAAGCTATCGGATCCCGGAGGCCGTGTCGCCGGGACTCCGCCGTCGCTTCCGGTCAACATTCCGGACTGGTCAAAGATCCTCGGAGACCAGTATAGGGAGAATAGGAGGAGAGACAGCATCGACGACGACGACGAGAGTGATGACGGAGGCGGCGGGCGGGTGCCTCCACACGAGTTTCTGGCGAGGACGAGGATGGCCTCATTCTCCGTTCACGAAGGGGTGGGGAGGACTCTGAAGGGACGAGATCTCAGCAGGGTCCGAAATGCGATTTGGGCCAAAACCGGGTTCGAGGACTAG 504 0.5873 MATSKGYFARPSYRFLPGDRDRDRDSPPIASDSIFEFDESDIYKSTRNNSPEFRKPIHASRMGRKSSSSKLSDPGGRVAGTPPSLPVNIPDWSKILGDQYRENRRRDSIDDDDESDDGGGGRVPPHEFLARTRMASFSVHEGVGRTLKGRDLSRVRNAIWAKTGFED 167
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele30g1167 167 Pfam Senescence regulator 38 167 IPR007608 -
Lele30g1167 167 MobiDBLite consensus disorder prediction 97 111 - -
Lele30g1167 167 PANTHER EMB|CAB72159.1 1 167 - -
Lele30g1167 167 MobiDBLite consensus disorder prediction 15 29 - -
Lele30g1167 167 MobiDBLite consensus disorder prediction 1 130 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele30g1167 Lele-ChrLele30 14592320 14592823 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele11g1167 11 18933640 18935109 Lele30g1167 30 14592320 14592823 CCT
Lele12g0155 12 1180703 1182680 Lele30g1167 30 14592320 14592823 CCT
Lele30g1167 30 14592320 14592823 Lele31g1308 31 19172066 19172572 hybridization
Lele30g1167 30 14592320 14592823 Lele32g0229 32 1366411 1367588 hybridization