Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele11g1034 ATGGCAATATCACCATCCAGCTTTTTGATGTTTCTACCCAAGATTTCATCTTCTTCCTTGGTTTGGTCTCTACCTTCCTCCCGCGGAGTACTGAAGCAAAGGGGAAGTGATAAGGTCCAGCGGCAAAGGAGGAGGCGAGAGGCGGAGCGTTGGAGTGGGAGACACGTGAACCCGCTTCTTCTTCTGCTTGCGCATGGAGCCAGTGAAGACGGCGGGAGTACTGCTGGTGCTGGAAGATGCTCTGCCCAACGAGATCGACCGCCTCCATGGTTGGCGGTGAAGGGAGGAGGGAGGGCTTTTGTGAAGTTGAACGAAGACGGTATCCTTCCCGTCCACCACACTAGGCGATCCATGGAGGTTCCGTCTCATTTGAAGCTTTCCCTTCTTTTATGCTTCCTATTGCTTTCAGCATCGCAGATTCAAGCCACAAGTGTCAAATACTGCGACAAGAAAGGAGACTATGTTGTGAAGGTGAATGAAGTTGAGATATCACCCAACCCTGTGGTTAGGGGAAAACCGGCTACCTTTAAGATTTCAGCTGCTACTGGTGGGGCTATTTCTGGCGGAAAGTTAGTAATTGAAGTTTCATACTTTGGAGTGCATGTCCATACAGAGACTCATGATCTTTGTGAGGAAGCATCCTGTCCTGTCACTGCAGGAAACTTTGAGCTTGCTCACACTCAAACACTACCTTCATTTACCCCACCGGGCTATTATATACTGAAGATGACGATGGAGGATGAGAAGAATGAGCCGTTAACTTGTGTCACCTTCAATTTCAAAATCGGCCTTGGATCTTCAGTGTCCGACATCTAA 816 0.4877 MAISPSSFLMFLPKISSSSLVWSLPSSRGVLKQRGSDKVQRQRRRREAERWSGRHVNPLLLLLAHGASEDGGSTAGAGRCSAQRDRPPPWLAVKGGGRAFVKLNEDGILPVHHTRRSMEVPSHLKLSLLLCFLLLSASQIQATSVKYCDKKGDYVVKVNEVEISPNPVVRGKPATFKISAATGGAISGGKLVIEVSYFGVHVHTETHDLCEEASCPVTAGNFELAHTQTLPSFTPPGYYILKMTMEDEKNEPLTCVTFNFKIGLGSSVSDI 271
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele11g1034 271 SMART pgtp_13 145 260 IPR003172 -
Lele11g1034 271 PANTHER NIEMANN PICK TYPE C2 PROTEIN NPC2-RELATED 126 262 IPR039670 GO:0015918|GO:0032934
Lele11g1034 271 Pfam ML domain 143 262 IPR003172 -
Lele11g1034 271 CDD PG-PI_TP 145 260 IPR033917 GO:0032366
Lele11g1034 271 Gene3D - 143 263 - -
Lele11g1034 271 SUPERFAMILY E set domains 142 262 IPR014756 -
Lele11g1034 271 FunFam putative phosphatidylglycerol/phosphatidylinositol transfer protein DDB_G0282179 143 264 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele11g1034 Lele-ChrLele11 17531941 17536090 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele32g0380 32 2360621 2362905 Lele11g1034 11 17531941 17536090 CCT
Lele09g1032 09 19504431 19508246 Lele11g1034 11 17531941 17536090 hybridization
Lele10g0985 10 21166352 21170342 Lele11g1034 11 17531941 17536090 hybridization