Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele11g0894 ATGTTCCGAAAGAAAAGCAACTACGCCTTTGACTCGTTTCCTGGGCTCAAATTCCAATGCCTTTCGGCTGCGGATGAATTTTACATATCACTACTTCGGTGTTTGATCTTCGAATTCTGCTCCGAAAATGGTTGTTCAATGCATGTGATCTTATATGTTGCCCTTTGTAGAGTAGATGCACAGAAGTTGGAAGAGTGGCCTCAGACTCAAAATCCAACTTCCCTGGTTCAGTTTTTGTCAAGAGAAGAAGTTGAGGGAATATTGAAGGATATTGCAGAAAGAGCAGGGGGAAAGGAGGCTTTTAGTTATAGTCGCTTCTTTGCTGTAGGCCTCTTTCGTCTCCTTGAGATGGTAAATGCAACAAAACCAACAATTTTGGGAAAGATCGGGGAGTTGGATGTGTATGGCAATTTGCTTTCCAAGTTGGTACAAGCAAAAGAGCTGTTGAAGGAATATGTTGACAGGAAGAAGAAGAAAAGGGAAGGAAGGGCTGAATCACAAAAGGCTGAGGCAATCGCAACGTGA 525 0.4286 MFRKKSNYAFDSFPGLKFQCLSAADEFYISLLRCLIFEFCSENGCSMHVILYVALCRVDAQKLEEWPQTQNPTSLVQFLSREEVEGILKDIAERAGGKEAFSYSRFFAVGLFRLLEMVNATKPTILGKIGELDVYGNLLSKLVQAKELLKEYVDRKKKKREGRAESQKAEAIAT 174
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele11g0894 174 Pfam Thylakoid formation protein 56 163 IPR017499 GO:0010207|GO:0015979
Lele11g0894 174 PANTHER PROTEIN THYLAKOID FORMATION 1, CHLOROPLASTIC 57 172 IPR017499 GO:0010207|GO:0015979
Lele11g0894 174 MobiDBLite consensus disorder prediction 155 174 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele11g0894 Lele-ChrLele11 9054404 9056568 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele11g0894 11 9054404 9056568 Lele29g0509 29 3075566 3077695 CCT
Lele11g0894 11 9054404 9056568 Lele11g0894 11 9054404 9056568 ECH
Lele09g0887 09 7200183 7202931 Lele11g0894 11 9054404 9056568 hybridization
Lele10g0815 10 6573199 6575883 Lele11g0894 11 9054404 9056568 hybridization