Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele10g0815 ATGAGATATAAGAGATCATACCGCTATGACCCTGTATTTGCTCTTGGTTTTGTCACTGTATATGATCAGCTTATGGAAGGATATCCTAGTGGTGAGGATCGAGATGCCATTTTCAAAGCATACATTGAGGCATTGAGAGAAGATCCAAACCAATACGGAGTAGATTCACAGAAGATGGAAGAGAGGTCTCGGACTCAAAATCCAACTTCCCTGGTTGAGTTTTTATTAAGAGAAGGAGAAGTTGAGGGAATATTGACGGATATTGCAGAAAGAGCGGGGGGAAATGGGGCTTTTAGTTATACTAGCTTCTTTGCCGTAGGCCTCTTTCGTCTCCTTGAGTTGGTAAATGCAACAGAACCAACAATCTCGGAAAAGCTTTGTGTGGCTTTGAACATTAACAGAAAAAGTGTAGATCATGATTTGGATGTGTACCGTAATCTGCTTTCCAAGTTGGTACAAGCAAAAGAGCTGTTGAAGGAATATGTTGACAGGGAGAAGAAGAAAGGGGAAGAAAGGGCTGAATCACAAAAGGCTAACGAGGCAATCACAACATGA 555 0.4162 MRYKRSYRYDPVFALGFVTVYDQLMEGYPSGEDRDAIFKAYIEALREDPNQYGVDSQKMEERSRTQNPTSLVEFLLREGEVEGILTDIAERAGGNGAFSYTSFFAVGLFRLLELVNATEPTISEKLCVALNINRKSVDHDLDVYRNLLSKLVQAKELLKEYVDREKKKGEERAESQKANEAITT 184
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele10g0815 184 PANTHER PROTEIN THYLAKOID FORMATION 1, CHLOROPLASTIC 1 183 IPR017499 GO:0010207|GO:0015979
Lele10g0815 184 Coils Coil 144 164 - -
Lele10g0815 184 MobiDBLite consensus disorder prediction 165 184 - -
Lele10g0815 184 Pfam Thylakoid formation protein 2 172 IPR017499 GO:0010207|GO:0015979
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele10g0815 Lele-ChrLele10 6573199 6575883 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele10g0815 10 6573199 6575883 Lele29g0510 29 3079080 3080121 CCT
Lele10g0815 10 6573199 6575883 Lele10g0815 10 6573199 6575883 ECH
Lele10g0815 10 6573199 6575883 Lele11g0894 11 9054404 9056568 hybridization
Lele10g0815 10 6573199 6575883 Lele12g0445 12 12342870 12346247 hybridization