Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele11g0884 ATGAGTCGTTACGACAATCCTTTCGATGAGGATGTGAATCCCTTTGCGGGTGGATCAAGCAGAGGAAAATCGTCGGGGAAATCAAAAAATGATGAAGGTGGATTCTCTAATATTGACCTCAAAGCAAAGGAAGCGGAACTTAAAGCCAAAGAAGCTGAACTGTCTAGGAGGGAACAGGAAGTAAAAAGAAAGGAAGATGCTATAGCACGGGCTGGAATAACTTTAGAGGTAAAAAATTGGCCATCTTTCTTCCCCATCATTCATCACGACATCGCAAGTGATATACCAATACATCTTCAGAGGATGCAGTATGTTGCATTCTCAACACTTTTAGGTTTGGTATTATGTCTTTTTTGGAACCTCTTTACAATGCTTGTGGCTTGTTTCAATGGACAAGGACCTGCAATCTTGTTCCTTGCTATTATCTACGTCATTTGTGGCATTCCAGGAGCCTACGTATTATGGTATCGCCCTCTTTATCGTGCTATGAGGACTGACAGTGCTCTCAAGTTTGGCTGGTTTTTTCTAAGTTACATGATCCATATCGGTTTCTGCATTTACGCTTCAATTGCCCCTCCATTTGTCCTTGCAGGACATTCTCTCACAGGATTTTTTCCTGCCCTAAATTTTATTGGCGACCGTCACATGCTTGGGATACTATACTTTGTTGGGTTTGCATTGTTCCTCGCGGAGACTCTGCTGAGCATCTACGTTATTCAGCAAGTACTAATGTACTTCCGTGGAAGTGGCAAGGCTGCAGAAGCTAGGCGTGAGGCGGCAAGAAGCACCGTCATGGCAGCTCTATGA 807 0.4362 MSRYDNPFDEDVNPFAGGSSRGKSSGKSKNDEGGFSNIDLKAKEAELKAKEAELSRREQEVKRKEDAIARAGITLEVKNWPSFFPIIHHDIASDIPIHLQRMQYVAFSTLLGLVLCLFWNLFTMLVACFNGQGPAILFLAIIYVICGIPGAYVLWYRPLYRAMRTDSALKFGWFFLSYMIHIGFCIYASIAPPFVLAGHSLTGFFPALNFIGDRHMLGILYFVGFALFLAETLLSIYVIQQVLMYFRGSGKAAEARREAARSTVMAAL 268
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele11g0884 268 MobiDBLite consensus disorder prediction 1 37 - -
Lele11g0884 268 Pfam SCAMP family 78 248 IPR007273 GO:0015031|GO:0016020
Lele11g0884 268 PANTHER SECRETORY CARRIER-ASSOCIATED MEMBRANE PROTEIN SCAMP 5 264 IPR007273 GO:0015031|GO:0016020
Lele11g0884 268 Coils Coil 37 67 - -
Lele11g0884 268 MobiDBLite consensus disorder prediction 18 32 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele11g0884 Lele-ChrLele11 8948061 8951659 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele11g0884 36 268 Miscellaneous Gene Families AT2G20840 65.236 4.63e-111 318
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele29g0515 29 3118508 3128026 Lele11g0884 11 8948061 8951659 CCT
Lele30g0896 30 12817095 12818894 Lele11g0884 11 8948061 8951659 CCT
Lele09g0878 09 7083912 7087767 Lele11g0884 11 8948061 8951659 hybridization
Lele10g0805 10 6484131 6487925 Lele11g0884 11 8948061 8951659 hybridization