Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele10g0805 ATGAGTCGCTACGACAATCCTTTCGACGAGGATGTGAATCCCTTTGCGGGTGGATCAAGTAGAGGAAAATCCTCGGGGAAATCAGATAATGATGAAGGTGGATTCTCTAATATCGACCTCAAAGCAAAGGAAGCGGAACTTAAAGCCAAAGAAGCTGAACTGTCGAGGAGGGAACAGGAAGTAAAACGAAAGGAAGATGCTATAGCACGGGCTGGAATAACTTTAGAGGTAAAAAATTGGCCATCTTTCTTCCCCATCATTCATCACGACATCGCAGGTGATATACCAATACATCTTCAGAGGATGCAGTATGTTGCATTCTCAACACTTTTGGGTTTGGTATTATGTCTTCTTTGGAACCTCTTCACAATGATTGTGGGTTGTTTCAAGGGACAAGGACCTGCAATCTTGTTCCTTGCTATTATCTACGTCATTTGTGGCATTCCAGGAGCCTACGTATTATGGTATCGCCCTCTTTATCGTGCTATGAGGACTGACAGTGCTATCAAGTTTGGCTGGTTTTTTCTTAGTTACATGGCAAGTTCATATATTTTCTTTGTCCGCACCACTGATTCCTCACCTGCACAAGAGTTTTCCTCATCTCATGTTTCCCTCTTTTTCTCCAAGCAGGTCCACATCGGTTTCTGCATTTACGCTTCAATTGCCCCTCCATTTGTCCTTGCAGGACATTCACTCACGATTTTTTCCTGCGCTAAATTTTATAGGCGACCGTCACATGCTTGGGGTAAGTTCCAATTTCGTATTACATGAGGAAATGCCTTCTCAAAAAGCAGCAGTTATACATCTTTTGACTTGCAGATACTATACTTTGTTGGGTTTGCATTGTTCCTCGCTGAGACTCTGCTGAGCATCTACGTTATTCAGCAAGTACTAATGTACTTCCGTGGAAGTGGCAAGGCTGCAGAAGCTAGGCGCGAGGCGGCGAGAAGCACCGTCATGGCAGCTCTATGA 972 0.4414 MSRYDNPFDEDVNPFAGGSSRGKSSGKSDNDEGGFSNIDLKAKEAELKAKEAELSRREQEVKRKEDAIARAGITLEVKNWPSFFPIIHHDIAGDIPIHLQRMQYVAFSTLLGLVLCLLWNLFTMIVGCFKGQGPAILFLAIIYVICGIPGAYVLWYRPLYRAMRTDSAIKFGWFFLSYMASSYIFFVRTTDSSPAQEFSSSHVSLFFSKQVHIGFCIYASIAPPFVLAGHSLTIFSCAKFYRRPSHAWGKFQFRITXGNAFSKSSSYTSFDLQILYFVGFALFLAETLLSIYVIQQVLMYFRGSGKAAEARREAARSTVMAAL 323
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele10g0805 323 Coils Coil 37 67 - -
Lele10g0805 323 MobiDBLite consensus disorder prediction 18 32 - -
Lele10g0805 323 MobiDBLite consensus disorder prediction 1 39 - -
Lele10g0805 323 Pfam SCAMP family 78 185 IPR007273 GO:0015031|GO:0016020
Lele10g0805 323 PANTHER SECRETORY CARRIER-ASSOCIATED MEMBRANE PROTEIN SCAMP 5 319 IPR007273 GO:0015031|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele10g0805 Lele-ChrLele10 6484131 6487925 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele10g0805 36 323 Miscellaneous Gene Families AT2G20840 51.042 3.41e-96 283
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele29g0515 29 3118508 3128026 Lele10g0805 10 6484131 6487925 CCT
Lele30g0896 30 12817095 12818894 Lele10g0805 10 6484131 6487925 CCT
Lele10g0805 10 6484131 6487925 Lele11g0884 11 8948061 8951659 hybridization
Lele10g0805 10 6484131 6487925 Lele12g0458 12 12466704 12470862 hybridization