Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele11g0780 ATGTGGAGAGATAGTGGCACTCCTGCTGATTCTTTCTACCAAGTCCGCCCCGAGTGTGCCGACGATGTCCCCAAAAGTCGATTTAAGATCAAGGCTGGTAGAACCCTAAGTTCAAGGAAATGGCATTCTGCATTTGATGCTGAAGGGCATCTGGATATAGGCAAGACTCTGAGTCGAATCTACCGAGGGGGAATCCATCCATCAATTAGGGGAGAAGTTTGGGAATTTTTACTTGGCTGCTATGATTCAAAGAGTACATTTGATGAAAGAGAGCAGATAAGACAGCAGCGAAGGATACAATATGCTAAATGGAAGGAAGATTGCCGCAAGTTGTTTCCACTTGTTGGAAGTGGGAAATTTATTACAGCACCTATAATCACAGAAGATGGCCAGCCAATTCAAGATCCATTGGTGTTGTTAGAAACAAATCCAGACAAGGGAGTGATTGCCCCTGCTCAAAATATCATAAATGATTCAAGTACAGGCAGTGCACATAACTTAGAAAAGGTGATGGACAAGAGAGTAATCCAGTGGATGTTAACTCTTCATCAAATAGGTCTTGATGTGGTTCGCACTGATAGGACACTGGTTTTCTATGAGAAGCAAGAGAACTTGTCAAAACTGTGGGATATTCTTGCTGTTTATTCGTGGATAGATATGGATGTGGGCTATTGTCAAGGAATGAGTGACCTTTGTTCCCCTATGGTAATTCTTCTCAATGACGAAGCTGATGCATTTTGGTGCTTTGAGCGTCTGATGCGCAGATTGCGAGGAAATTTCAGATGCACCAATAACTCAGTTGGGGTGGAGGCTCAACTAAGTAACTTGGCTTCAGTTACTCAAGTCATTGATCCGAAACTTCATCAACATATAGAGGCTCTTGGTGGAGGTGACTATCTGTTTGCTTTTCGGATGCTTATGGTTTTGTTTCGTCGAGAATTCTCCTTTTGTGACTCCTTGTACCTTTGGGAGATGATGTGGGCTCTGGAATACGATCCTGACTTGTTCTTGATATATGAAGAGCCTGAATCAGTTTTTAAAAAAGCTGAGAGATCTACTAAAGGAAGAACGAAGTCATTACGTCAATGTGGGAAGTTTGAGAGAGAAAACATGAAAAATGCTGCAAAGACTGCTGATGCTCCTCTTCCCATATCTGTTTTCCTTGTTGCCAGTGTGTTGAAAGATAAGAGCTCAAAACTAATGCAGGAAGCACGTGGCCTGGATGATGTTGTCAAGATATTGAATGACATGACCGGAAAATTAGATGCCAAAAAAGCTTGCACTGGGGCGATGAAACTTCACAGAAAATATTTGAAAAAGGCTAATGCCAATAAACCATAA 1341 0.4191 MWRDSGTPADSFYQVRPECADDVPKSRFKIKAGRTLSSRKWHSAFDAEGHLDIGKTLSRIYRGGIHPSIRGEVWEFLLGCYDSKSTFDEREQIRQQRRIQYAKWKEDCRKLFPLVGSGKFITAPIITEDGQPIQDPLVLLETNPDKGVIAPAQNIINDSSTGSAHNLEKVMDKRVIQWMLTLHQIGLDVVRTDRTLVFYEKQENLSKLWDILAVYSWIDMDVGYCQGMSDLCSPMVILLNDEADAFWCFERLMRRLRGNFRCTNNSVGVEAQLSNLASVTQVIDPKLHQHIEALGGGDYLFAFRMLMVLFRREFSFCDSLYLWEMMWALEYDPDLFLIYEEPESVFKKAERSTKGRTKSLRQCGKFERENMKNAAKTADAPLPISVFLVASVLKDKSSKLMQEARGLDDVVKILNDMTGKLDAKKACTGAMKLHRKYLKKANANKP 446
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele11g0780 446 PANTHER TBC1 DOMAIN FAMILY MEMBER GTPASE-ACTIVATING PROTEIN 35 415 - -
Lele11g0780 446 SUPERFAMILY Ypt/Rab-GAP domain of gyp1p 49 290 IPR035969 -
Lele11g0780 446 SMART tbc_4 61 357 IPR000195 -
Lele11g0780 446 Gene3D putative rabgap domain of human tbc1 domain family member 14 like domains 159 260 - -
Lele11g0780 446 FunFam TBC1 domain family member 15-like 162 260 - -
Lele11g0780 446 ProSiteProfiles TBC/rab GAP domain profile. 64 330 IPR000195 -
Lele11g0780 446 SUPERFAMILY Ypt/Rab-GAP domain of gyp1p 268 437 IPR035969 -
Lele11g0780 446 Pfam Rab-GTPase-TBC domain 170 328 IPR000195 -
Lele11g0780 446 Gene3D - 266 445 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele11g0780 Lele-ChrLele11 7839413 7847084 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele11g0780 11 7839413 7847084 Lele11g0780 11 7839413 7847084 ECH
Lele09g0780 09 6103527 6109596 Lele11g0780 11 7839413 7847084 hybridization
Lele10g0705 10 5330988 5335977 Lele11g0780 11 7839413 7847084 hybridization