Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele09g0780 ATGTGGAGAGATAGTGGCACTCCTGCTGATTCTTTCTACCAGGTCCGCCCTGAGTGTGCCGACGATGTCCCCAAAAGTCGATTTAAGATCAAGGCTGGTAGAACCCTAAGTTCAAGGAAATGGCATTCTGCATTTGATGCTGAAGGGCATCTGGATATAGGCAAGACACTGAGTCGAATCTACCGAGGGGGAATCCATCCATCAATTAGGGGAGAAGTTTGGGAATTTTTACTTGGCTGCTATGATCCAAAGAGTACATTTGATGAAAGAGAGAAGATAAGACAGCAGCGAAGGATACAATATGCTAAATGGAAGGAAGATTGCCGCAAGTTGTTTCCACTTGTTGGAAGTGGTAAATTTATTACAGCACCTATAATAACAGAAGATGGCCAGCCAATTCAAGATCCATTGGTGTTGTTAGAAACAAATCCAGACAAGGGAGTGATTGTCCCTGCTCAAAATGGCATAAATGATTCAAGTACAGGCGGTGCACATAACTTAGAAAAGGTGATGGACAAGAGTGTAATCCAGTGGATGTTAACTCTTCATCAAATAGGTCTTGATGTGGTTCGCACTGATAGGACACTGGTTTTCTATGAGAAGCAAGAGAACTTGTCAAAACTGTGGGATATTCTTGCTGTTTATTCGTGGATAGATATGGATGTGGGTTATTGTCAAGGAATGAGTGACCTTTGTTCCCCTATGGTAATTCTTCTCAATGACGAAGCTGATGCATTTTGGTGCTTTGAGCGTCTTATGCGCAGATTGCGAGGAAATTTCAGATGCACCAATAACTCAGTTGGGGTGGAGGCTCAATTAAGTAACTTGGCTTCAGTTACTCAAGTCATTGATCCGAAACTTCATCAACATATAGAGGCTCTTGGTGGAGGTGACTATCTGTTTGCTTTTCGGATGCTTATGGTTTTGTTTCGTCGAGAATTCTCCTTTTGTGACTCCTTGTACCTTTGGGAGATGATGTGGGCTCTGGAATACGATCCTGACTTGTTCTTGATATATGAAGAGCCTGAATCAGTTTGTAAAAAAGCTGAGAGATCTTCTAAAGGAAGAACGAAGTCATTACGTCAATGTGGGAAATTTGAGATAGAAAACATGAAAAATGCTGCAAAGATTGCTGATGCTCCTCTTCCCATATCTGTTTTCCTTGTTGCCAGTGTGTTGAAAGATAAGAGCTCAAAACTAATGCAGGAAGCACGTGGCCTGGATGATGTTGTGAAGATATTGAATGACATGACCGGAAAATTAGATGCCAAAAAAGCTTGCACTGGGGCGATGAAACTTCACAGAAAATATTTGAAAAAGGCTAATAAGTCATAA 1335 0.415 MWRDSGTPADSFYQVRPECADDVPKSRFKIKAGRTLSSRKWHSAFDAEGHLDIGKTLSRIYRGGIHPSIRGEVWEFLLGCYDPKSTFDEREKIRQQRRIQYAKWKEDCRKLFPLVGSGKFITAPIITEDGQPIQDPLVLLETNPDKGVIVPAQNGINDSSTGGAHNLEKVMDKSVIQWMLTLHQIGLDVVRTDRTLVFYEKQENLSKLWDILAVYSWIDMDVGYCQGMSDLCSPMVILLNDEADAFWCFERLMRRLRGNFRCTNNSVGVEAQLSNLASVTQVIDPKLHQHIEALGGGDYLFAFRMLMVLFRREFSFCDSLYLWEMMWALEYDPDLFLIYEEPESVCKKAERSSKGRTKSLRQCGKFEIENMKNAAKIADAPLPISVFLVASVLKDKSSKLMQEARGLDDVVKILNDMTGKLDAKKACTGAMKLHRKYLKKANKS 444
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele09g0780 444 SUPERFAMILY Ypt/Rab-GAP domain of gyp1p 268 437 IPR035969 -
Lele09g0780 444 SUPERFAMILY Ypt/Rab-GAP domain of gyp1p 49 290 IPR035969 -
Lele09g0780 444 Gene3D - 266 444 - -
Lele09g0780 444 Gene3D putative rabgap domain of human tbc1 domain family member 14 like domains 163 260 - -
Lele09g0780 444 PANTHER TBC1 DOMAIN FAMILY MEMBER GTPASE-ACTIVATING PROTEIN 35 415 - -
Lele09g0780 444 SMART tbc_4 61 353 IPR000195 -
Lele09g0780 444 FunFam TBC1 domain family member 15-like 163 260 - -
Lele09g0780 444 Pfam Rab-GTPase-TBC domain 172 328 IPR000195 -
Lele09g0780 444 ProSiteProfiles TBC/rab GAP domain profile. 64 330 IPR000195 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele09g0780 Lele-ChrLele09 6103527 6109596 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele09g0780 09 6103527 6109596 Lele09g0780 09 6103527 6109596 ECH
Lele09g0780 09 6103527 6109596 Lele11g0780 11 7839413 7847084 hybridization
Lele09g0780 09 6103527 6109596 Lele12g0562 12 14049689 14054604 hybridization