Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele10g0705 ATGTCCCCAAAAGTCGATTTAAGATCAAGGGTACAATATGCTAAATTGAAGGAAGATTGCCGCAAGTTGTTTCCACTTGTTGGAACTGGAAAATTTATTACAGCACCTATAATCGCAGAAGATGGCCATCCAATTCAAGATCCATTGGTGTTGTTAGAAACAAATCCAGACAAGGGAGTGATTGTCCCAGCTCAAAATGGCATAAATGATTCAAGTACAGGTCTTGATGTGGTTCGCACTGATAGGACACTGGATTTTTATGAGAAGCAAGAGAAATTGTCAAAACTATGGGATATTCTTGCTGTTTATGCCTGGATAGATATGTATGTGGGCTATTGTCAAGTATTGTGGCTTTTCAACTTTATCTCAACTTCTCACAATATGCCTCCTTATCTTGGATTTCCAAAGCGAGGAAATTTCAGATGCATCAATAACTCAGTTGGGGTGGAGGCTCAACTAAGTAACTTGGCTTCCGTTACTCAAGTCATTTATCCAAAACTTCATCAACATATTGGTAATTTCTTGAACTTGCTCTTGGTGGAGGTGACTATCTGTTTGCTTTTCGGATGCTTATGGTTTTGTTTCGTCGAGAATTCTCCTTTTGTGACTCCTTGTTATGTTGAGCCTTTTATTTATACTGTTTCTGCATATCAAAATTATGCCTTAAAAGCTTCTGTGATCTCCCAGATTTATAATGTTGTCAGTCAGTTTGAGAGAGAAAACATGAAAAATGCTGCAAAGACTGCTGATGCTCCTCTTCCCATATCTGTTTTCCTTGTTGCCTGTGTGTTGAAAGATAAGAGCTCAAAACTAATGCAGGAAGCACGTGGCCTGGATGATGTTGTCAAGATGTTGAATGACGTGACCGGAAAATTAGATGCCAAAAAAGCTTGCACTGGGGCAATGAAACTTCACAGAAAATATTTGAAAAAGGTAGCGTGTCCTGCACATCTTATCTTCAGACATTGTATATCCTCATTTTTCTGA 987 0.387 MSPKVDLRSRVQYAKLKEDCRKLFPLVGTGKFITAPIIAEDGHPIQDPLVLLETNPDKGVIVPAQNGINDSSTGLDVVRTDRTLDFYEKQEKLSKLWDILAVYAWIDMYVGYCQVLWLFNFISTSHNMPPYLGFPKRGNFRCINNSVGVEAQLSNLASVTQVIYPKLHQHIGNFLNLLLVEVTICLLFGCLWFCFVENSPFVTPCYVEPFIYTVSAYQNYALKASVISQIYNVVSQFERENMKNAAKTADAPLPISVFLVACVLKDKSSKLMQEARGLDDVVKMLNDVTGKLDAKKACTGAMKLHRKYLKKVACPAHLIFRHCISSFF 328
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele10g0705 328 Gene3D putative rabgap domain of human tbc1 domain family member 14 like domains 65 128 - -
Lele10g0705 328 PANTHER TBC1 DOMAIN FAMILY MEMBER GTPASE-ACTIVATING PROTEIN 74 286 - -
Lele10g0705 328 SUPERFAMILY Ypt/Rab-GAP domain of gyp1p 75 170 IPR035969 -
Lele10g0705 328 SUPERFAMILY Ypt/Rab-GAP domain of gyp1p 148 308 IPR035969 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele10g0705 Lele-ChrLele10 5330988 5335977 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele10g0705 10 5330988 5335977 Lele10g0705 10 5330988 5335977 ECH
Lele10g0705 10 5330988 5335977 Lele11g0780 11 7839413 7847084 hybridization
Lele10g0705 10 5330988 5335977 Lele12g0562 12 14049689 14054604 hybridization