Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele11g0772 ATGTTTAAAATTGTGGATGAGGACATGAGCAATGTGGAGGAGAGAGAAGGGGGCGAAAACAGTTTGACAGCGTCTGTGAGAAAGACGAGACGGGGATTACCTTACAGAGAGGTTAATAAGGAGGTGATTTTGAGGAATCGGTTATCTCTGTATTCTAGGAAGTTGCTATTTCTCATCTCTTTGGTTTTGGGGATGATGAATGATGATCAGAAACCGCAGCAAGCAGGCGGTGTTCGGTCCGGTCGGACCAATGGGTTTTTTCCCAGCTCGCTCCGGGCTATCTCCAGCTACCTCAGGGTCGTTTCCTCCGGTGCTTCCAACGTTGCGCGTTCGGCAGCATCAGTTGCGTCCTCGATCGTGGATAGGGTTGATGACGCCAGTTCTGATCAGGTCATCTGGGCTGGTTTGGATAAACTAGAGGGTGAGGGAGAAGTCACCCGTCAAGTTCTACTTCTAGGATTTCGATTGGGCTTCCAGGTTTGGGATGTTGAAGATTCACATAATGTACATGACCTAGTTTCCAGGCATGATGGTCCTGTTTCTTTTATGCAAATGTTGCCAAATCCAATTGCATCGAAGAGATCAGCAGAAAAGTTTGCAAACAGCCGCCCACTGTTAGCTGTATGTGCTGATGGTTTCTTTGCTGGAGGCAGTAATGTTCAGGATGGACTGACCACCCCCTACAATGGGAGCACTTCCAATTTCCATGGGCAATCAAATGGAAATTATCTGCCAACGACTGTTCAGTTTTATTCCATGAGATCCCAATCATATGTGCATGCGCTAAAATTTAGATCAGTTGTTTATTGTGTAAGGTGCAGTTCTCGAATAGTTGCTGTTTCTCAATCAACTCAGATACACTGTTTTGATGCTGTAACATTAGAAAGAGAGTATACTATACTTACCAATCCTATAATTGTAAGTTGTCCTGGTTCTGGAGGTGTAGGCTATGGACCACTTGCTGTGGGTTCAAGATGGCTGGCTTATAGTGGAAGTTCAGTCACAATATCTAATTCTGCGCATGTCAATCCACAAGACTTGACAACTTCAGCAAACTTTCCTGGTTTTTCTTCAAATGGGAGCTTGGTTGCGCACTATGCCAAAGAATCAAGCAAGCAACTTGCTTCTGGGATTGTGTCCCTTGGAGATATGGGGTATAAGAAACTTTCCAGATACTACTCTGAGCTTCAGTCTGATAGCAATAGTTCGTCACGGTCTGTAAATTCAGGTTGGAAGGGCAATGGAACCATTAATGGACATTCAGCAGATGCTGACAACATTGGAATGGTCATTGTAAGGGATATTGTCAGTAAAAATGTAGTTACTCAAATGCGAGCCCACAAAAGTCCTATTTCAGCCTTACGCTTTGATCCCAGTGGAACCATTTTGGTGACTGCTTCGGTTCAGGGGCATAATATAAATGTATATAAGATAATGCCTTGTCACTCAGAGGCAGCTGATGCTGGCCCTTCTAACGTTCATCTCTACAGGTTGCAGCGTGGCTATACCAATGCAATAATACAGGATATTAGTTTCAGTGATGACAGCAATTGGATTATGATAAGTTCCTCTAGGGGCACTAGCCATCTATTTGCTATGAATCCTCAGGGAGGATCTGTGAATATTCAAGCCCTTGATTGTAGTCTTCCAACACAAAATAATGGATTGAGCAGTATTACTAATCAAGGAGTCCTTTATCCTAATAGTTCAGCCTTGCAAATGCATAAAAAGCAGAGCCTGTGTGCAGCTGGGCCTCCAATCACTCTTTCTGTTGTTAGCAGAATTAGGAATGGAATGAATGGCTGGAGAGGCACCGTGAGCGGTGCTGCTGCAGCTGCCACAGGAAAGATGGGTTCCCTTTCTGGGGCTATTGCTTCATCTTTCTGTAACTGCAAGAGCAGTGGCATATATATTGATGAGAAGCATTCAAAGACAAAGTATCACTTGTTGGTTTTTTCTTCCTCTGGTTCTATGATACAATATGCTCTCCAGATGTTAAATGGTCGAGATTCAGCTATTGTTTCGGGATTAAACCCGGCTTATGAATTACATCCACAAGCTGATGCAAGATTAGCAGTAGAAGCTATTCAGAAATGGAATATATGTCAAAGACTAAGTTTGCGGGAGCGAGAAGATAACGTTGACATTTATGGTGATAATGGAATTCCTGACGGCAATAAAATTTATCCTGAAGAATCGAAAGAGGACACTATCAGTAGCCCACTCAAGAATGAAGTCGTGAAAGCAAATTCCTCTTCAGAGGAAGATCGTCATCTGTATATTTCCCAGGCTGAACTGCAGATGCACCAGGCTCAGACTCCATTGTGGGCGAAGTCTGAGATATATTTTCATTCAATGGTGAAAGAAGCTACCATAATAGATGAAGCAGCTGCTGCAGGAGGGGAATTTGAGATTGAAAGGATTCCAACTCGCATGGTTCAAGCTAGGTCAAAACACTTAATTCCTGTTTTTGACTATCTTCAGACCCCAAAAGCCCAACAACCAAGGTCGAATGAACAATTGTTACATCAGAGTAGTGGGATGTCTGAAAATGGCAAGATTTCAGACTATACAACAAACTCTACTGAACTGGACAATGGCATTCAAGTACCTGGGTTGGATGATCGTCTTCTGCCAACAAAAACCAGAGGCTATAGAAGGCCTGCTAATGGGGAATCACATTGA 2685 0.4335 MFKIVDEDMSNVEEREGGENSLTASVRKTRRGLPYREVNKEVILRNRLSLYSRKLLFLISLVLGMMNDDQKPQQAGGVRSGRTNGFFPSSLRAISSYLRVVSSGASNVARSAASVASSIVDRVDDASSDQVIWAGLDKLEGEGEVTRQVLLLGFRLGFQVWDVEDSHNVHDLVSRHDGPVSFMQMLPNPIASKRSAEKFANSRPLLAVCADGFFAGGSNVQDGLTTPYNGSTSNFHGQSNGNYLPTTVQFYSMRSQSYVHALKFRSVVYCVRCSSRIVAVSQSTQIHCFDAVTLEREYTILTNPIIVSCPGSGGVGYGPLAVGSRWLAYSGSSVTISNSAHVNPQDLTTSANFPGFSSNGSLVAHYAKESSKQLASGIVSLGDMGYKKLSRYYSELQSDSNSSSRSVNSGWKGNGTINGHSADADNIGMVIVRDIVSKNVVTQMRAHKSPISALRFDPSGTILVTASVQGHNINVYKIMPCHSEAADAGPSNVHLYRLQRGYTNAIIQDISFSDDSNWIMISSSRGTSHLFAMNPQGGSVNIQALDCSLPTQNNGLSSITNQGVLYPNSSALQMHKKQSLCAAGPPITLSVVSRIRNGMNGWRGTVSGAAAAATGKMGSLSGAIASSFCNCKSSGIYIDEKHSKTKYHLLVFSSSGSMIQYALQMLNGRDSAIVSGLNPAYELHPQADARLAVEAIQKWNICQRLSLREREDNVDIYGDNGIPDGNKIYPEESKEDTISSPLKNEVVKANSSSEEDRHLYISQAELQMHQAQTPLWAKSEIYFHSMVKEATIIDEAAAAGGEFEIERIPTRMVQARSKHLIPVFDYLQTPKAQQPRSNEQLLHQSSGMSENGKISDYTTNSTELDNGIQVPGLDDRLLPTKTRGYRRPANGESH 894
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele11g0772 894 MobiDBLite consensus disorder prediction 831 867 - -
Lele11g0772 894 FunFam Breast carcinoma-amplified sequence 3 356 584 - -
Lele11g0772 894 Pfam Breast carcinoma amplified sequence 3 584 822 IPR022175 -
Lele11g0772 894 MobiDBLite consensus disorder prediction 831 894 - -
Lele11g0772 894 MobiDBLite consensus disorder prediction 879 894 - -
Lele11g0772 894 MobiDBLite consensus disorder prediction 1 21 - -
Lele11g0772 894 Gene3D - 157 564 IPR015943 GO:0005515
Lele11g0772 894 SUPERFAMILY WD40 repeat-like 151 533 IPR036322 GO:0005515
Lele11g0772 894 PANTHER BREAST CARCINOMA AMPLIFIED SEQUENCE 3 79 854 IPR045142 GO:0006914
Lele11g0772 894 MobiDBLite consensus disorder prediction 1 15 - -
Lele11g0772 894 SMART WD40_4 437 477 IPR001680 GO:0005515
Lele11g0772 894 SMART WD40_4 255 290 IPR001680 GO:0005515
Lele11g0772 894 SMART WD40_4 491 532 IPR001680 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele11g0772 Lele-ChrLele11 7782658 7789730 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele11g0772 11 7782658 7789730 Lele11g0772 11 7782658 7789730 ECH
Lele09g0770 09 6046777 6052097 Lele11g0772 11 7782658 7789730 hybridization
Lele10g0699 10 5278404 5283670 Lele11g0772 11 7782658 7789730 hybridization