Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele11g0764 ATGGCTGCCATGGCTGCTCTTCAGAGCTCCTTTACCTCTCTCTCTCTTTCCTCCAACAGTTTCATGGGGCAACGCCTCTCCCCCATCACTCTCTGCCCCGTTCGGGGCAAGTCAACAGAGAAGCCATGCCTCATCGTAACGAGGCTTAAACGATGGGAGCGAAAGGAATGTAAGCCAAATAGCCTTCCAATCTTGCACAAAATGCATGTCAAAGTTGGGGATACAGTGAAAGTAATATCTGGACGTGAAAAAGGTAAAATTGGAGAGATTACTATGATCTTCAAGCATAACAGCACCGTCATCGTGAAAGACACGAATTTGAAGACAAAGCATATGAAGAGTAGAGAAGAAGGCGAGCCAGGGCAAATCATTAAGATCGAAGGTCCCATCCACAGCTCAAATGTGATGCTATACTCTAAAGACCAGAATGTGGCAAGTCGTGTGGGGCATAAGATTCTTGAGAATGGTAAAAGAGTCCGTTACCTAATAAAAACTGGAGAGATAATTGATACTTCAGAGAATTGGAAGAAATTGAAGGAGGCCAAACAGAAAAATGAAGAAGCTACTGCTGCTGCTTCTTAA 582 0.4416 MAAMAALQSSFTSLSLSSNSFMGQRLSPITLCPVRGKSTEKPCLIVTRLKRWERKECKPNSLPILHKMHVKVGDTVKVISGREKGKIGEITMIFKHNSTVIVKDTNLKTKHMKSREEGEPGQIIKIEGPIHSSNVMLYSKDQNVASRVGHKILENGKRVRYLIKTGEIIDTSENWKKLKEAKQKNEEATAAAS 193
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele11g0764 193 ProSitePatterns Ribosomal protein L24 signature. 73 90 IPR005825 GO:0003735|GO:0005840|GO:0006412
Lele11g0764 193 SUPERFAMILY Translation proteins SH3-like domain 66 168 IPR008991 -
Lele11g0764 193 Pfam KOW motif 72 103 IPR005824 -
Lele11g0764 193 Gene3D - 63 168 IPR014722 -
Lele11g0764 193 SMART kow_9 69 96 IPR005824 -
Lele11g0764 193 Pfam Ribosomal proteins 50S L24/mitochondrial 39S L24 106 169 IPR003256 GO:0003735|GO:0005840|GO:0006412
Lele11g0764 193 Hamap 50S ribosomal protein L24 [rplX]. 68 164 IPR003256 GO:0003735|GO:0005840|GO:0006412
Lele11g0764 193 PANTHER MITOCHONDRIAL RIBOSOMAL PROTEIN L24 2 191 IPR003256 GO:0003735|GO:0005840|GO:0006412
Lele11g0764 193 Coils Coil 178 193 - -
Lele11g0764 193 CDD KOW_RPL26 73 137 IPR041988 GO:0003723
Lele11g0764 193 TIGRFAM rplX_bact: ribosomal protein uL24 67 169 IPR003256 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele11g0764 Lele-ChrLele11 7718487 7720800 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele11g0764 11 7718487 7720800 Lele11g0764 11 7718487 7720800 ECH
Lele09g0761 09 5986242 5988639 Lele11g0764 11 7718487 7720800 hybridization
Lele10g0691 10 5217218 5221064 Lele11g0764 11 7718487 7720800 hybridization