Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele10g0691 ATGCCTCATATTCCGATTTCCCTTTCCATGAACTGCTTATGTCTCACTTTAGGCTTTAAAGAACAGCTTCAATCCACAGTCGCAGTAGCCGGGGAAGCAGGGGGGAAAATGGCTGCCATGGCTGCTCTTCAGAGCTCCTTCACCTCTCTCTCCCTTTCCTCTAACAGTTTCATGGGGCAACGCCTCTCCCCCATGACTCTCTGCCCCGTTCCGGGCAAGCCAACAGAGAAGCCATGCCTCATCGTAATGAGGCTTAAACGATGGGAGAGAAAGGAATGTAAGCCAAACAGCCTTCCAATCTTGCACAAAATGCATGTCAAAGTTGGGGATACAGTGAAAGTAATATCTGGACGTGAAAAAGGTAAAATTGGAGAGATTACTAAGATCTCCAAGCATAACAGCACCGTCATCGTGAAAGACACGAATTTGAAGACAAAGCACATGAAGAGTAGAGAAGAAGGCGAACCAGGGCAAATCATTAAGATCGAAGGTCCCATCCACAGCTCAAATGTGATGCTATACTCTAAAGACCAGAATGTGGCAAGTCGTGTGGGGCATAAGATTCTTGAGAATGGCAAAAGAGTACGTTACCTAATAAAAACTGGAGAGATAATTGATACTGCAGAGAATTGGAAGAAACTGAAGGAGGCGAAAAAGAAAGATGAAGAAGCTGCTGTGGCTTCTTAA 687 0.4527 MPHIPISLSMNCLCLTLGFKEQLQSTVAVAGEAGGKMAAMAALQSSFTSLSLSSNSFMGQRLSPMTLCPVPGKPTEKPCLIVMRLKRWERKECKPNSLPILHKMHVKVGDTVKVISGREKGKIGEITKISKHNSTVIVKDTNLKTKHMKSREEGEPGQIIKIEGPIHSSNVMLYSKDQNVASRVGHKILENGKRVRYLIKTGEIIDTAENWKKLKEAKKKDEEAAVAS 228
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele10g0691 228 CDD KOW_RPL26 109 173 IPR041988 GO:0003723
Lele10g0691 228 PANTHER MITOCHONDRIAL RIBOSOMAL PROTEIN L24 38 224 IPR003256 GO:0003735|GO:0005840|GO:0006412
Lele10g0691 228 Pfam KOW motif 108 139 IPR005824 -
Lele10g0691 228 SMART kow_9 105 132 IPR005824 -
Lele10g0691 228 ProSitePatterns Ribosomal protein L24 signature. 109 126 IPR005825 GO:0003735|GO:0005840|GO:0006412
Lele10g0691 228 Pfam Ribosomal proteins 50S L24/mitochondrial 39S L24 142 205 IPR003256 GO:0003735|GO:0005840|GO:0006412
Lele10g0691 228 SUPERFAMILY Translation proteins SH3-like domain 102 204 IPR008991 -
Lele10g0691 228 Hamap 50S ribosomal protein L24 [rplX]. 104 200 IPR003256 GO:0003735|GO:0005840|GO:0006412
Lele10g0691 228 TIGRFAM rplX_bact: ribosomal protein uL24 103 205 IPR003256 GO:0003735|GO:0005840|GO:0006412
Lele10g0691 228 Gene3D - 99 204 IPR014722 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele10g0691 Lele-ChrLele10 5217218 5221064 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele10g0691 10 5217218 5221064 Lele10g0691 10 5217218 5221064 ECH
Lele10g0691 10 5217218 5221064 Lele11g0764 11 7718487 7720800 hybridization
Lele10g0691 10 5217218 5221064 Lele12g0574 12 14183336 14185805 hybridization