Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele09g0761 ATGACTCGAGATTCTCCATTATCATCAGAAAGTAGAAACAACAGCTTCAAGCCACAGTCGCAGTATCCGGGAAAGCAAGGGAAAATGGCTGCCATGGCTGCTCTTCAGAGCTCCTTTACCTCTCTCTCTCTTTCATCCAACAGTTTCATGGGGCAACGCCTCTCCCCCATCACTCTCTGCCCCGTTCGGGGCAAGTCAACAGAGAAGCCATGCCACATTGTAACGAGGCTTAAACGATGGGAGCGAAAGGAATGTAAGCCAAATAGCCTTCCAATCTTGCACAAAATGCATGTCAAAGTTGGAGATACAGTGAAAGTAATATCTGGACGTGAAAAAGGTAAAATTGGAGAGATTACTATGATCTTCAAGCACAACAGCACCGTCATCGTGAAAGACACGAATTTGAAGACAAAGCATATGAAGAGTAGAGAAGAAGGCGAGCCAGGGCAAATCATTAAGATCGAAGGTCCCATCCACAGCTCAAATGTGATGCTATACTCTAAAGACCAGAATGTGGCAAGTCGTGTGGGGCATAAGATTCTTGAGAATGGCAAAAGAGTCCGTTACCTAATAAAAACTGGAGAGATAATTGATACTGCAGAGAATTGGAAGAAATTGAAGGAGGCCAAACAGAAAAATGAAGAAGCTACTGCTGCTGCTTCTTAA 666 0.4414 MTRDSPLSSESRNNSFKPQSQYPGKQGKMAAMAALQSSFTSLSLSSNSFMGQRLSPITLCPVRGKSTEKPCHIVTRLKRWERKECKPNSLPILHKMHVKVGDTVKVISGREKGKIGEITMIFKHNSTVIVKDTNLKTKHMKSREEGEPGQIIKIEGPIHSSNVMLYSKDQNVASRVGHKILENGKRVRYLIKTGEIIDTAENWKKLKEAKQKNEEATAAAS 221
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele09g0761 221 CDD KOW_RPL26 101 165 IPR041988 GO:0003723
Lele09g0761 221 Pfam Ribosomal proteins 50S L24/mitochondrial 39S L24 134 197 IPR003256 GO:0003735|GO:0005840|GO:0006412
Lele09g0761 221 Pfam KOW motif 100 131 IPR005824 -
Lele09g0761 221 ProSitePatterns Ribosomal protein L24 signature. 101 118 IPR005825 GO:0003735|GO:0005840|GO:0006412
Lele09g0761 221 TIGRFAM rplX_bact: ribosomal protein uL24 95 197 IPR003256 GO:0003735|GO:0005840|GO:0006412
Lele09g0761 221 MobiDBLite consensus disorder prediction 1 28 - -
Lele09g0761 221 SUPERFAMILY Translation proteins SH3-like domain 94 196 IPR008991 -
Lele09g0761 221 MobiDBLite consensus disorder prediction 1 22 - -
Lele09g0761 221 Hamap 50S ribosomal protein L24 [rplX]. 96 192 IPR003256 GO:0003735|GO:0005840|GO:0006412
Lele09g0761 221 SMART kow_9 97 124 IPR005824 -
Lele09g0761 221 PANTHER MITOCHONDRIAL RIBOSOMAL PROTEIN L24 31 219 IPR003256 GO:0003735|GO:0005840|GO:0006412
Lele09g0761 221 Gene3D - 91 196 IPR014722 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele09g0761 Lele-ChrLele09 5986242 5988639 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele09g0761 09 5986242 5988639 Lele09g0761 09 5986242 5988639 ECH
Lele09g0761 09 5986242 5988639 Lele11g0764 11 7718487 7720800 hybridization
Lele09g0761 09 5986242 5988639 Lele12g0574 12 14183336 14185805 hybridization