Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele11g0590 ATGGACCCAGATTCTAGTATAAAATTTGTGGAGAACAGACCATTTAATGACCAGAGGTACTTTCTTGATGATCAAAAGTTGAAGGACTTGGGTTGGTCTGAGAGGACCCCTTGGGAAGAGGGGCTGAAGAAAACCATAGAGTGGCATACCAATAATCCTGATTGGTGGGGTGATGTCAGTGGGGCATTGCTTCCTCATCCAAGGATGCTGATGATGCCGGGTGGGATGGAGAGACATTTTGAAGGCTCTGAAGAAGACAAGTCTGCATCCTATGCCTCCACTAATACTCGAATGGTGGTTCCATCGACTAAGAACACTAGCACTCAGCAGAAACCTGCTTATAAGTTCTTGATCTATGGTAGAACAGGGTGGATAGGGGGTCTGTTAGGGAAACTCTGTGAAAAACAAGGGATTCCATTTGAATATGGAAAAGGGCGCTTAGAGGATCGCTCATCACTCATGGCAGATTTCCACAATGTGAAGCCGACGCACGTTTTCAATGCTGCTGGAGTGACTGGTAGACCCAATGTTGACTGGTGTGAATCTCATAAGACAGAAACCATTCGCACCAATGTTGCTGGTACTTTAACACTGGCCGATGTCTGCAGAGAACAGGGGCTCTTGATGGTAAATTATGCCACTGGGTGTATATTCGAGTATGATGCAGCACATCCAGAGGGTTCTGGCATTGGTTTTAAGGAGGAAGACAAACCCAACTTCACTGGTTCTTTCTATTCCAAAACTAAAGCTATGGTCGAAGAGCTTTTGAAAGAATATGACAATGTGTGCACTCTCAGGGTTCGCATGCCAATTTCATCTGATCTGAGTAACCCACGCAACTTCATTACAAAGATCACTCGTTACACCAAAGTGGTCAACATTCCAAACAGCATGACTATCTTGGATGAGCTTCTGCTTATTTCAATTGAAATGGCAAAGCGAAACTTGCGTGGCATCTGGAACTTCACAAATCCTGGGGCTGTCAGCCACAACGAGATCCTTGAGATGTACAGGGATTACATCGATCCCAACTTCAAGTGGGTTAACTTCACACTTGAAGAGCAAGCCAAGGTGATAGTTGCTCCAAGAAGCAACAATGAGATGGATGCATCCAAGTTGAAGAAAGAGTTCCCAGAGTTGCTTTCCATCAAGGAATCACTGCTCAAATACGTCTTCGAACCAAACTGCAAGACCCATAAAGATTAA 1206 0.4469 MDPDSSIKFVENRPFNDQRYFLDDQKLKDLGWSERTPWEEGLKKTIEWHTNNPDWWGDVSGALLPHPRMLMMPGGMERHFEGSEEDKSASYASTNTRMVVPSTKNTSTQQKPAYKFLIYGRTGWIGGLLGKLCEKQGIPFEYGKGRLEDRSSLMADFHNVKPTHVFNAAGVTGRPNVDWCESHKTETIRTNVAGTLTLADVCREQGLLMVNYATGCIFEYDAAHPEGSGIGFKEEDKPNFTGSFYSKTKAMVEELLKEYDNVCTLRVRMPISSDLSNPRNFITKITRYTKVVNIPNSMTILDELLLISIEMAKRNLRGIWNFTNPGAVSHNEILEMYRDYIDPNFKWVNFTLEEQAKVIVAPRSNNEMDASKLKKEFPELLSIKESLLKYVFEPNCKTHKD 401
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele11g0590 401 Gene3D - 103 400 - -
Lele11g0590 401 Gene3D - 21 36 - -
Lele11g0590 401 FunFam Bifunctional dTDP-4-dehydrorhamnose 3,5-epimerase/dTDP-4-dehydrorhamnose reductase 105 401 - -
Lele11g0590 401 CDD dTDP_HR_like_SDR_e 115 387 - -
Lele11g0590 401 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 4 63 IPR036291 -
Lele11g0590 401 Gene3D - 5 48 - -
Lele11g0590 401 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 113 391 IPR036291 -
Lele11g0590 401 PANTHER DTDP-4-DEHYDRORHAMNOSE REDUCTASE 114 397 IPR005913 -
Lele11g0590 401 Pfam RmlD substrate binding domain 115 287 IPR029903 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele11g0590 Lele-ChrLele11 5793908 5795192 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele11g0590 11 5793908 5795192 Lele11g0590 11 5793908 5795192 ECH
Lele09g0579 09 4389006 4394359 Lele11g0590 11 5793908 5795192 hybridization
Lele10g0531 10 3841808 3848155 Lele11g0590 11 5793908 5795192 hybridization