Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele10g1240 ATGTCCTCCTCCTTCTCTGCTACCCAGCACTTGAGTGCTACGCTCTCCGCCCCTCTCGCTCGTCGCCGCTACAATTCCCCTCGACCCTCCTTCCTCAAATGTCATCTCTCGTCCTCCCACGTCTCCGATTCCTCCAATAACCACGCCCTCTTCAAAACCCTCTCCAAGACCGTCGCCCTCTCTTCCGCCGCCGCCCTCCTCCTCTACTCCACCCGCCTCCCGGTGCTCCTCTTCAATGGATCCGGAGATTTCGGCGGCTGCGGTAATGGCCTAGGCGGAGGTGGAGGCGGAGGGAACTGGTTCGGCGGCACAGGTGGAGATGGAAATGGAGGGTTCTTCTCTAGACTTTTCTCCCCGGCAGATGCTATTGCCGATGAATCTCCTTCTCAGGAGTGGGATTCCCATGGGCTGCCGGCCAACATTGTTGTTCAACTCAATAAGCTCAGTGGATTTAAGAAATATAAAATTTCGGAGATTCTATTCTTCGATCGGAGGAGATGGAAAACGGTGGGCACCGAAGATTCCTTCTTCGAGATGGTTTCTCTGCGTCCCGGTGGTACATACACCAAGGGCCAGCTTCAGAAGGAACTTGAGACTCTAGCTACCTGCGGAATGTTCGAGAAGGTAGATATGGAAGGCAAAACCAACCCAGATGGAACCATCGGAATTACTATATCTTTCACTGAGAGCACGTGGCAGTCAGCCGATCGGTTCCGCTGCATCAATGTGGGATTGATGCCGCAGTCGAAGCCCATTGAGATGGACGCGGATATGACTGATAAGGAGAAGCTGGAGTACTTTAGAAGTCAGGAGGAGGACTACAAGAGGCGAATTCAGAGGGCGAGGGCGTGTCTTCTGCCAATGCCTGTGCACATGGAGATTATGCAGATGCTGAAGGAGCAAGGAAAGGTGAGTGCGAGGCTGTTGCAGAAGATAAGGGATCGAGTCCAGAAGTGGTATCAGGATGAAGGCTTTGCATGCGCACAGGTGGTTAATTTCGGGAACCTGAACACCAAGGAGGTCGTCTGTGAGGTTGTAGAAGGGGATATCACCCAATTGGCCATTCAATTCCAGGATAAGCTTGGCAATGTGGTTGAAGGTAACACTGATGTTGCTGTGGTCGAAAGAGAATTGCCGAAACAGCTTCGCCCAGGTTACATTTTCAACATTGAGGCAGGGAAGCAAGCTTTAAGAAATATTAACTCCCTTGCTCTGTTTTCAAACATTGAAGTGAATCCACGGCCTGATGAGAAGAATGAGGGAGGCATTGTTGTTGAAATCAAGCTTAAAGAATTAGAACAGAAGACGGCAGAAGTCAGTACCGAGTGGAGTATTGTCCCGGGGCGAGGGGGACGTCCTACATTGGCTTCACTGCAGCCAGGAGGAACTGTTACTTTTGAACATCGGAATTTGCAAGGATTGAATAGATCTCTTATTGGTTCGGTGACGACTAGCAACTTCCTCAATCCTCAGGATGATCTAGCATTTAAGCTTGAGTATGTGCATCCTTACTTGGATGGTGTATACAATCCAAATAACCGTACTCTTCGGGTAAGCTGCTTCAACGGTCGAAAGTTGAGTCCAGTATTCACTGGAGGGCCAGGGGTTGATGAAGTACCTCCAATATGGGTTGATCGTGCTGGTGTCAAAGCCAATATCACTGAGAATTTCACACGTCAGAGTAAATTTACTTATGGACTTGTGATGGAAGAGATAGCGACACGTGATGAAAGTAGTCATGTCTGTTCAAATGGTCAACGAGTATTGCCTAGTGGGGGAATTAGTGCCGATGGACCTCCAACCACCATCAGTGGCACTGGCATTGATCGGATGGCATTTTTACAGGCCAATATTACACGTGATAACACAAAATTTGTGAATGGAGCTATCGTTGGAGACCGAAATGTGTTCCAGTTGATGTCAGTGGAGGAAGGTGCTGGCAAAGCACCACCACCAGTGCTCGTTCTCCATAGTCATTATGGTGGTTGTGTAGGTGATCTTCCTAGTTATGATGCTTTTACTCTTGGAGGACCCTATTCTGTGAGGGGTTACAACATGGGTGAGCTTGGCGCAGCCAGAAACATCCTTGAGGTTGCTGCCGAGTTACGGGTACCTATCAAAGGGACGCATGTGTATGCCTTTGCAGAACATGGAAATGATCTTTGGAGTTCGAAGAACGTGAAAGGGAATCCCACAGAAGTGTATAGGCGAATGGGATATGGGTCGTCCTATGGAGTTGGTCTCAAGCTTGGTTTAGTTAGAGCAGAATACGCCGTTGATCATAACTCAGGAGCCGGTGCATTATTCTTCCGTTTTGGGGAGAGATTTTGA 2331 0.4912 MSSSFSATQHLSATLSAPLARRRYNSPRPSFLKCHLSSSHVSDSSNNHALFKTLSKTVALSSAAALLLYSTRLPVLLFNGSGDFGGCGNGLGGGGGGGNWFGGTGGDGNGGFFSRLFSPADAIADESPSQEWDSHGLPANIVVQLNKLSGFKKYKISEILFFDRRRWKTVGTEDSFFEMVSLRPGGTYTKGQLQKELETLATCGMFEKVDMEGKTNPDGTIGITISFTESTWQSADRFRCINVGLMPQSKPIEMDADMTDKEKLEYFRSQEEDYKRRIQRARACLLPMPVHMEIMQMLKEQGKVSARLLQKIRDRVQKWYQDEGFACAQVVNFGNLNTKEVVCEVVEGDITQLAIQFQDKLGNVVEGNTDVAVVERELPKQLRPGYIFNIEAGKQALRNINSLALFSNIEVNPRPDEKNEGGIVVEIKLKELEQKTAEVSTEWSIVPGRGGRPTLASLQPGGTVTFEHRNLQGLNRSLIGSVTTSNFLNPQDDLAFKLEYVHPYLDGVYNPNNRTLRVSCFNGRKLSPVFTGGPGVDEVPPIWVDRAGVKANITENFTRQSKFTYGLVMEEIATRDESSHVCSNGQRVLPSGGISADGPPTTISGTGIDRMAFLQANITRDNTKFVNGAIVGDRNVFQLMSVEEGAGKAPPPVLVLHSHYGGCVGDLPSYDAFTLGGPYSVRGYNMGELGAARNILEVAAELRVPIKGTHVYAFAEHGNDLWSSKNVKGNPTEVYRRMGYGSSYGVGLKLGLVRAEYAVDHNSGAGALFFRFGERF 776
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele10g1240 776 Gene3D membrane protein fhac 350 433 - -
Lele10g1240 776 Gene3D membrane protein fhac: a member of the omp85/tpsb transporter family 456 774 - -
Lele10g1240 776 FunFam Protein TOC75-3, chloroplastic isoform A 152 227 - -
Lele10g1240 776 Gene3D membrane protein fhac 152 227 - -
Lele10g1240 776 FunFam Protein TOC75-3 chloroplastic 351 432 - -
Lele10g1240 776 Pfam Omp85 superfamily domain 664 760 IPR000184 GO:0019867
Lele10g1240 776 PANTHER SORTING AND ASSEMBLY MACHINERY SAMM50 PROTEIN FAMILY MEMBER 139 773 IPR039910 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele10g1240 Lele-ChrLele10 23447729 23451494 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele10g1240 10 23447729 23451494 Lele11g1270 11 19614064 19617863 hybridization
Lele10g1240 10 23447729 23451494 Lele12g0052 12 512419 516194 hybridization