Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele10g1216 ATGGCGACAAATTCTTCTAATGGAGAGCACCAAACCACAACACAGACAACAAAGCCACCTCCCTTGCCTTCTCCCTTGCGCTTTTCCAAGTTCTTTCAGCCCAACATGAGAATTCTTGTCACTGGAGGAGCTGGATTCATTGGCTCTCACTTAGTTGACAGATTAATGCAGAATGAGAAAAATGAGGTTGTTGTTGCTGACAACTTCTTCACTGGATCCAAGGATAACCTTAGAAAATGGATTGGTCATCCTAGATTTGAGTTGATTCGTCATGATGTGACGGAGCAATTGTTTATTGAGGTTGATCAGATCTACCATCTTGCTTGTCCGGCTTCTCCGATTTTCTACAAATATAATCCCGTGAAGACTATAAAGACTAATGTGATAGGAACACTGAACATGCTTGGGCTTGCAAAAAGAGTGGGAGCAAGGATTTTACTAACTTCTACTTCAGAAGTATATGGGGATCCTCTTGTGCATCCACAACCAGAAAGTTACTGGGGCAATGTGAACCCTATTGGAGTTCGGAGTTGCTATGATGAGGGAAAGCGTGTGGCAGAAACTTTAATGTTTGATTATCATAGGCAGCATGGGATAGAAATACGCATTGCCAGAATCTTCAACACATATGGACCCCGCATGAATATTGATGATGGGCGAGTTGTGAGCAACTTTATTGCTCAAGCACTTCGTGGGGAGCCCCTGACTGTACAAGTTCCCGGGACACAAACTCGTAGCTTCTGCTATGTCTCTGATATGGTCGATGGCCTTATCCGTCTAATGGAAGGAGAAAACACTGGTCCAATTAACATTGGGAATCCAGGTGAATTTACTATGACTGAACTTGCTGAGACAGTGAAGGAGCTTATTAATCCAAGCGTGGAGATAAAGATGGTGGAAAACACTCCTGATGATCCTCGACAGAGAAAACCAGACATAACAAAAGCGAAGGAATTGTTGGGGTGGGAACCAAAGGTCAAGCTGCGAGATGGTCTTCCTCTGATGGAAGAGGATTTCCGTCTCAGGCTTGGAGTTGCCAAAAAGAATTAA 1050 0.4371 MATNSSNGEHQTTTQTTKPPPLPSPLRFSKFFQPNMRILVTGGAGFIGSHLVDRLMQNEKNEVVVADNFFTGSKDNLRKWIGHPRFELIRHDVTEQLFIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTSTSEVYGDPLVHPQPESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQALRGEPLTVQVPGTQTRSFCYVSDMVDGLIRLMEGENTGPINIGNPGEFTMTELAETVKELINPSVEIKMVENTPDDPRQRKPDITKAKELLGWEPKVKLRDGLPLMEEDFRLRLGVAKKN 349
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele10g1216 349 MobiDBLite consensus disorder prediction 1 24 - -
Lele10g1216 349 CDD UGD_SDR_e 36 340 - -
Lele10g1216 349 FunFam UDP-glucuronic acid decarboxylase 6 35 344 - -
Lele10g1216 349 MobiDBLite consensus disorder prediction 1 17 - -
Lele10g1216 349 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 31 340 IPR036291 -
Lele10g1216 349 PANTHER UDP-GLUCURONIC ACID DECARBOXYLASE-RELATED 23 344 IPR044516 GO:0042732|GO:0048040|GO:0070403
Lele10g1216 349 Gene3D - 35 342 - -
Lele10g1216 349 Pfam GDP-mannose 4,6 dehydratase 39 333 IPR016040 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele10g1216 Lele-ChrLele10 23277849 23280701 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele10g1216 36 348 Miscellaneous Gene Families AT1G02000 24.425 1.42e-16 78.6
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele10g1216 10 23277849 23280701 Lele11g1242 11 19449257 19453581 hybridization
Lele10g1216 10 23277849 23280701 Lele12g0080 12 696548 699672 hybridization