Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele10g1200 ATGGCAACGTCCACGGTGCAGCTTCCAGCTGCGCAAGCAAGCACCCCTAGGAAGAAAATGACGAAACAGTTGACAGGAAAGAGGGATGATAGCCCTCTACATACAGCAGCAAGATCAGGAAATATGGCCGTTGCGAAGGAGATCCTTACTGGCACTGAAGAAGAATCTGAACTCAATGTATTGTTAGCTAAGCAAAATCAAGCTGGAGAAACAGCTCTCTATGTTGCTGCTGAATATGGTTATGTTGAATTAGTTAGGGAGATGATCAAATATTATGATCTTGCCAATGCTGGAATTAAAGCTAGAAATGGTTTTGATGCATTCCTCATTGCTGCAAAACAAGGCGATTTAGATGTACTGAAGATCCATATGGAGGCTTATCCTGAATTATACATGACAGTGGATCCATCAAACACCACAGCTTTGCACATGGCAGCAACACAGGGGCACACAGAGGTTGTGAATTTTCTATTGGAAGCAGGAAGTAGCATAGCAACCATTGCCAGAAGTAATGGGAAAACAGCCCTACATTCTGCTGCAAGAAATGGGCATTTGGAGGTTGTTAAAGCGATTCTGGAGAAGGAGCCGACGGTTGCAACGAGGACCGATAAGAAGGGCCAAACAGCACTTCACATGGCTGTGAAGGGACAAAACATTGAGGTAGTTGAAGAGTTGATAAAAGCAGATCCTTTGTCAATTAACATGGTTGATAACAAGGGAAACGCAGCATTGCACATTGCTACAAGGAAAGGCAGGACTCAGATTGTGAAGATGCTTCTTGGACAGAGGGAAACGGACAAAACGGCGGTTAACAGAAGTGGTGAGACAGCGATTGACACTGCAGAGAAAACTGGGAACGCTGAAATTAAAGCAATTTTAGAAGAACATGGTGTGCAGAGTGCCAAGAACATAAAGCCTCAATCTGCCACAAACACAGCACGTGAACTGAAACAAACAGTGAGTGACATAAAACACGAAGTGCATAACCAATTGGAACACACACGACAAACCAGAAAACGAGTCCAAGGCATAGCCAAACGTATAAACAAAATGCATGCAGAAGGGCTTAACAACGCTATAAACTCCACAACTGTGGTGGCAGTACTAATCGCCACCGTGGCCTTTGCCGCAATATTCACAGTTCCAGGCCAGTACGTTGATGACCCAAAAGAGATACCTCCGGGAGAGACCTTAGGCGAAGCAAACATAGCTCCACAAGTTCCGTTCATAATTTTCTTTGTGTTCGATTCCATAGCACTCTTCATATCTCTGGCCGTGGTGGTGGTGCAAACGTCGGTGGTGGTAATAGAGAGCAAAGCGAAGAAGCAGATGATGGCTATTATTAACAAGCTAATGTGGCTGGCATGTGTGATGATAACGGTGGCGTTCTTGGCGTTGGCGTTTGTAGTGGTGGGGAAGCATGAGAGGTGGCTAGCGATAGGAGTGACGATAATAGGGACAACAATAATGGCGACAACGTTGGGGACGATGTCGTATTGGGTGATTAGGCATCGAATTGAGGCGTCAAATTTGAGGAGCATTAGGAGATCCTCTCTGGGAAGCAGGTCGAGGTCTTTTTCAGTGTCGGTCATGTCAGATTCTGAGCTACTCAATAAAATGTATGCCATTTAG 1632 0.4516 MATSTVQLPAAQASTPRKKMTKQLTGKRDDSPLHTAARSGNMAVAKEILTGTEEESELNVLLAKQNQAGETALYVAAEYGYVELVREMIKYYDLANAGIKARNGFDAFLIAAKQGDLDVLKIHMEAYPELYMTVDPSNTTALHMAATQGHTEVVNFLLEAGSSIATIARSNGKTALHSAARNGHLEVVKAILEKEPTVATRTDKKGQTALHMAVKGQNIEVVEELIKADPLSINMVDNKGNAALHIATRKGRTQIVKMLLGQRETDKTAVNRSGETAIDTAEKTGNAEIKAILEEHGVQSAKNIKPQSATNTARELKQTVSDIKHEVHNQLEHTRQTRKRVQGIAKRINKMHAEGLNNAINSTTVVAVLIATVAFAAIFTVPGQYVDDPKEIPPGETLGEANIAPQVPFIIFFVFDSIALFISLAVVVVQTSVVVIESKAKKQMMAIINKLMWLACVMITVAFLALAFVVVGKHERWLAIGVTIIGTTIMATTLGTMSYWVIRHRIEASNLRSIRRSSLGSRSRSFSVSVMSDSELLNKMYAI 543
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele10g1200 543 Gene3D - 4 168 IPR036770 -
Lele10g1200 543 MobiDBLite consensus disorder prediction 1 35 - -
Lele10g1200 543 ProSiteProfiles Ankyrin repeat region circular profile. 239 260 - -
Lele10g1200 543 Gene3D - 169 342 IPR036770 -
Lele10g1200 543 ProSiteProfiles Ankyrin repeat profile. 171 203 IPR002110 GO:0005515
Lele10g1200 543 SUPERFAMILY Ankyrin repeat 32 298 IPR036770 -
Lele10g1200 543 ProSiteProfiles Ankyrin repeat region circular profile. 137 164 - -
Lele10g1200 543 Pfam Ankyrin repeats (3 copies) 89 164 IPR002110 GO:0005515
Lele10g1200 543 Pfam Ankyrin repeats (3 copies) 171 234 IPR002110 GO:0005515
Lele10g1200 543 ProSiteProfiles Ankyrin repeat profile. 137 169 IPR002110 GO:0005515
Lele10g1200 543 MobiDBLite consensus disorder prediction 1 20 - -
Lele10g1200 543 ProSiteProfiles Ankyrin repeat region circular profile. 205 227 - -
Lele10g1200 543 ProSiteProfiles Ankyrin repeat profile. 239 260 IPR002110 GO:0005515
Lele10g1200 543 ProSiteProfiles Ankyrin repeat profile. 205 227 IPR002110 GO:0005515
Lele10g1200 543 SMART ANK_2a 28 60 IPR002110 GO:0005515
Lele10g1200 543 SMART ANK_2a 205 235 IPR002110 GO:0005515
Lele10g1200 543 SMART ANK_2a 239 269 IPR002110 GO:0005515
Lele10g1200 543 SMART ANK_2a 103 132 IPR002110 GO:0005515
Lele10g1200 543 SMART ANK_2a 68 97 IPR002110 GO:0005515
Lele10g1200 543 SMART ANK_2a 137 166 IPR002110 GO:0005515
Lele10g1200 543 SMART ANK_2a 171 200 IPR002110 GO:0005515
Lele10g1200 543 Pfam Ankyrin repeat 240 261 IPR002110 GO:0005515
Lele10g1200 543 Pfam Domain of unknown function 354 469 IPR026961 -
Lele10g1200 543 ProSiteProfiles Ankyrin repeat region circular profile. 171 194 - -
Lele10g1200 543 PANTHER PROTEIN PHOSPHATASE 1 REGULATORY SUBUNIT 11 527 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele10g1200 Lele-ChrLele10 23146531 23148916 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele10g1200 11 543 Miscellaneous Gene Families AT1G07710 75.047 0.0 763
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele10g1200 10 23146531 23148916 Lele11g1224 11 19330330 19332742 hybridization
Lele10g1200 10 23146531 23148916 Lele12g0097 12 819470 821855 hybridization