Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele09g1266 ATGTCTTCCTCCTTCTCTGCTACCCAGCACTTGAGTGCTACGCTCTCCGCCCCCCTCCCTCGTCGCCGCAACAATTCCCCTCGACCCTACTCTGTTAAATGTCATCTCTCTTCTTCCCACGATTCTGATTCCTCTAATAATCACGCCCTCTTCAAAACCCTCTCCAAGGCTATTGCTCTCTCTTCCGCCGCCGCCCTCCTCCTCAACTCCACCCACCTCCCGGTACTCCTTTCTAATGGATCCGGAGATTTCGGCGGCGGCAGTAATGGCCTAGGCGGTGGCGGAGGCGGAGGGAACTGGTTCGGCGGCACAGGCGGAGATGGGAATGGGGGGTTCTTCTCTAGACTTTTCTCCCCGGCAGATGCTATTGCCGATGAGTCCCCTTCTCAGGAGTGGGATTCCCATGGGCTGCCTGCCAACATTGTTGTTCAACTCAATAAGCTCAGTGGATTTAAGAAATATAAAATTTCGGATATTCTATTCTTCGATCGGAGGAGGTGGAAAACAGTGGGCACCGAGGATTCCTTCTTCGAGATGGTTTCTCTGCGTCCTGGTGGTACATACACCAAGGCCCAGCTTCAGAAGGAGCTTGAGACTCTAGCTACCTGCGGAATGTTCGAGAAGGTAGATATGGAAGGCAAAACCAACGCCGATGGAAGCATCGGAATTACAATATCTTTCACTGAGAGCACGTGGCAGTCAGCCGATCGGTTCCGCTGCATCAATGTGGGATTGATGCCGCAGTCGAAGCCCATTGAGATGGACACGGATATGACTGATAAGGAGAAGCTGGAGTACTTTAGAAGTCAGGAGGAGGACTACAAGAGGAGAATTCAGAGGGCGAGGGCGTGTCTTCTGCCGATGCCTGTGCATATGGAGATTATGCAGATGCTGAAGGAGCAAGGAAAGGTGAGTGCCAGGCTGTTGCAGAAGATAAGGGATCGAGTCCAGAAGTGGTATCAGGATGAAGGCTTTGCGTGTGCACAGGTGGTTAATTTTGGAAACCTGAACACCAAGGAGGTCGTCTGTGAGGTTGTAGAAGGGGATATCACCCAATTGGTCATTCAATTCCAGGATAAGCTTGGCAATGTGGTTGAAGGTAACACTGATGTTGCCGTGGTCGAAAGAGAACTGCCGAAACAGCTTCGCCCAGGTTACATTTTCAACATTGAGGCAGGGAAGCAAGCTTTAAGAAACATTAACTCCCTTGCTCTGTTTTCAAACATTGAAGTGAATCCACGGCCTGATGAGAAGAATGAGGGAGGCATTATTGTTGAAATTAAGCTTAAAGAATTAGAACAGAAGACGGCAGAAGTCAGTACTGAGTGGAGTATTGTCCCAGGTCGAGGAGGACGTCCTACATTGGCTTCACTGCAGCCAGGAGGAACTGTTAGTTTTGAACATCGGAATTTGCAAGGATTGAATAGATCTCTTATAGGTTCGGTGACAACTAGCAACTTCCTCAATCCTCAGGATGATCTGGCATTTAAGCTTGAGTATGTACATCCTTACTTGGATGGTGTATACAATCCAAATAACCGTACTCTTCGGGTGAGCTGCTTCAACAGTCGAAAGTTGAGTCCAGTATTCACTGGAGGGCCAGGGGTTGATGAAGTACCCCCAATATGGGTTGATCGTGCTGGTGTCAAAGCCAATATCACTGAGAATTTCACACGTCAGAGTAAATTTACTTATGGACTTGTGATGGAAGAGATAACAACACGTGATGAAAGTAGTCATATCTGTTCAAGTGGTCAACGAGTATTGCCTAGTGGAGGAATTAGTGCCGATGGACCTCCAACCACCCTCAGTGGCACTGGCATTGATCGGATGGCATTTTTACAGGCCAATATTACACGTGATAACACAAAGTTTGTGAATGGAGCTATCGTTGGAGACCGAAATGTGTTCCAGGTGGATCAAGGCCTTGGGATTGGCAGCAATTTCCCATTCTTTAATCGTCACCAGCTGACTGTGACCCGATTTATCCAGTTGACGTCAGTGGAGGAAGGTGCTGGCAAAGCACCACCACCAGTGCTCGTTCTCCATAGTCATTATGGTGGTTGTGTAGGTGATCTTGCTAGTTACGATGCCTTTACTCTTGGAGGACCCTATTCTGTGAGGGGTTACAACATGGGTGAGCTTGGCGCAGCCAGAAACATCCTTGAGCTTGCTGCCGAATTACGGGTACCCATCAAAGGGACGCATGTGTATGCCTTTGCAGAACATGGAAATGATCTTGGGAGTTCGAAGAACGTGAAAGGGAATCCCACAGAAGTCTATAGGCGAATGGGATATGGGTCGTCCTATGGAGTTGGTCTCAAGCTTGGTTTAGTTAGAGCAGAATACGCTGTTGATCATAACTCAGGAACCGGTGCATTATTCTTCCGTTTTGGGGAGAGATTTTGA 2409 0.4848 MSSSFSATQHLSATLSAPLPRRRNNSPRPYSVKCHLSSSHDSDSSNNHALFKTLSKAIALSSAAALLLNSTHLPVLLSNGSGDFGGGSNGLGGGGGGGNWFGGTGGDGNGGFFSRLFSPADAIADESPSQEWDSHGLPANIVVQLNKLSGFKKYKISDILFFDRRRWKTVGTEDSFFEMVSLRPGGTYTKAQLQKELETLATCGMFEKVDMEGKTNADGSIGITISFTESTWQSADRFRCINVGLMPQSKPIEMDTDMTDKEKLEYFRSQEEDYKRRIQRARACLLPMPVHMEIMQMLKEQGKVSARLLQKIRDRVQKWYQDEGFACAQVVNFGNLNTKEVVCEVVEGDITQLVIQFQDKLGNVVEGNTDVAVVERELPKQLRPGYIFNIEAGKQALRNINSLALFSNIEVNPRPDEKNEGGIIVEIKLKELEQKTAEVSTEWSIVPGRGGRPTLASLQPGGTVSFEHRNLQGLNRSLIGSVTTSNFLNPQDDLAFKLEYVHPYLDGVYNPNNRTLRVSCFNSRKLSPVFTGGPGVDEVPPIWVDRAGVKANITENFTRQSKFTYGLVMEEITTRDESSHICSSGQRVLPSGGISADGPPTTLSGTGIDRMAFLQANITRDNTKFVNGAIVGDRNVFQVDQGLGIGSNFPFFNRHQLTVTRFIQLTSVEEGAGKAPPPVLVLHSHYGGCVGDLASYDAFTLGGPYSVRGYNMGELGAARNILELAAELRVPIKGTHVYAFAEHGNDLGSSKNVKGNPTEVYRRMGYGSSYGVGLKLGLVRAEYAVDHNSGTGALFFRFGERF 802
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele09g1266 802 MobiDBLite consensus disorder prediction 1 45 - -
Lele09g1266 802 MobiDBLite consensus disorder prediction 30 45 - -
Lele09g1266 802 Gene3D membrane protein fhac 350 433 - -
Lele09g1266 802 Gene3D membrane protein fhac: a member of the omp85/tpsb transporter family 456 802 - -
Lele09g1266 802 TIGRFAM 3a0901s03IAP75: chloroplast envelope protein translocase, IAP75 family 82 802 IPR005689 GO:0006886|GO:0015450
Lele09g1266 802 FunFam Protein TOC75-3, chloroplastic isoform A 152 227 - -
Lele09g1266 802 Gene3D membrane protein fhac 152 227 - -
Lele09g1266 802 MobiDBLite consensus disorder prediction 1 21 - -
Lele09g1266 802 FunFam Protein TOC75-3 chloroplastic 351 432 - -
Lele09g1266 802 Pfam Omp85 superfamily domain 470 802 IPR000184 GO:0019867
Lele09g1266 802 PANTHER SORTING AND ASSEMBLY MACHINERY SAMM50 PROTEIN FAMILY MEMBER 139 799 IPR039910 -
Lele09g1266 802 FunFam Protein TOC75-3 chloroplastic 456 802 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele09g1266 Lele-ChrLele09 21431737 21435539 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele09g1266 09 21431737 21435539 Lele11g1270 11 19614064 19617863 hybridization
Lele09g1266 09 21431737 21435539 Lele12g0052 12 512419 516194 hybridization