Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele09g0603 ATGGAGCTTGGGATCACCCCCATTGTGACCTCCGGGCTGGTGATGCAACTGCTTGCTGGTTCAAAGATCATTGAAGTAGACAACAATGTCCGTGAAGATCGTGCCCTCTTAAACGGAGCACAGAAGCTTCTTGGCATCCTGATAGCTGTTGGAGAGGCAGTTGCCTATGTTCTTTCTGGGATGTATGGAAGTGTAGGCCAACTTGGAGTAGGGAATGCTATACTCATAATCGTTCAGCTATGCTTTGCTGGTATCATTGTGATTTGCTTAGATGAACTTCTTCAAAAAGGATATGGCCTGGGTTCTGGAATTTCCCTATTCATTGCAACTAATATCTGTGAAAATATTATATGGAAGGCATTTAGTCCCACCACCATTAACAGTGGACGTGGTGCTGAATTTGAGGGTGCTGTTATTGCTCTATTCCATTTGTTGATAACTAGAACCGACAAAGTTCGGGCTCTACGTGAGGCATTTTACAGGCAGAATCTTCCTAACGTGACAAATCTTCTTGCTACTGTTTTAATATTCTTAATTGTGATATACTTCCAAGGTTTCCGTGTGGTTTTGCCTGTAAGATCAAAGAATGCCCGTGGACAGCAGGGTTCATATCCTATTAAACTATTTTATACCTCTAACATGCCCATTATTCTTCAGTCTGCTCTGGTTTCCAATCTATACTTTATCTCTCAGCTGCTTCACCGAAAGTACAGTGGGAACTTCTTCGTCAACTTGTTGGGCAAATGGAAGGAGACTGAATATGGTGGTGGTCAGTCTATTCCTGTGGGTGGTATTGCATATTACATTACAGCACCATCTAGCTTAGCTGATATGGCAGCCAATCCTTTCCATGCTTTGTTCTATTTGGTGTTCATGTTGTCAGCCTGTGCCATGTTCTCTAAAACTTGGATTGAAGTCTCTGGATCATCTGCTAGAGATGTTGCCAAACAATTGAAGGAACAACAAATGGTGATGCCAGGGCACCGTGAGTCGAACTTGCAGAAGGAGCTAAACCGATATATCCCCACGGCAGCCGCATTTGGAGGGATGTGCATTGGGGCACTGACCGTGTTAGCTGATTTCATGGGGGCAATTGGGTCAGGCACAGGGATTTTACTTGCAGTGACCATTATTTATCAGTACTTCGAGACATTCGAGAAGGAGAGAGCCAGCGAGCTTGGCTTCTTTGGTTTCTAA 1197 0.4403 MELGITPIVTSGLVMQLLAGSKIIEVDNNVREDRALLNGAQKLLGILIAVGEAVAYVLSGMYGSVGQLGVGNAILIIVQLCFAGIIVICLDELLQKGYGLGSGISLFIATNICENIIWKAFSPTTINSGRGAEFEGAVIALFHLLITRTDKVRALREAFYRQNLPNVTNLLATVLIFLIVIYFQGFRVVLPVRSKNARGQQGSYPIKLFYTSNMPIILQSALVSNLYFISQLLHRKYSGNFFVNLLGKWKETEYGGGQSIPVGGIAYYITAPSSLADMAANPFHALFYLVFMLSACAMFSKTWIEVSGSSARDVAKQLKEQQMVMPGHRESNLQKELNRYIPTAAAFGGMCIGALTVLADFMGAIGSGTGILLAVTIIYQYFETFEKERASELGFFGF 398
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele09g0603 398 FunFam Transport Sec61 subunit alpha isoform 2 1 396 - -
Lele09g0603 398 SUPERFAMILY Preprotein translocase SecY subunit 1 388 IPR023201 -
Lele09g0603 398 PIRSF SecY_Sec61alpha 1 393 IPR002208 GO:0015031|GO:0016020
Lele09g0603 398 Pfam SecY 1 381 IPR002208 GO:0015031|GO:0016020
Lele09g0603 398 PANTHER SECY/SEC61-ALPHA FAMILY MEMBER 1 392 IPR002208 GO:0015031|GO:0016020
Lele09g0603 398 TIGRFAM 3a0501s007: preprotein translocase, SecY subunit 1 389 IPR002208 GO:0015031|GO:0016020
Lele09g0603 398 Gene3D SecY subunit domain 1 397 IPR023201 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele09g0603 Lele-ChrLele09 4604892 4607429 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele09g0603 1 398 Miscellaneous Gene Families AT2G34250 92.462 0.0 749
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele09g0603 09 4604892 4607429 Lele09g0603 09 4604892 4607429 ECH
Lele09g0603 09 4604892 4607429 Lele11g0614 11 5997582 6000093 hybridization
Lele09g0603 09 4604892 4607429 Lele12g0721 12 15360679 15364590 hybridization