Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele11g0614 ATGGAGCTTGGGATCACCCCCATTGTGACCTCCGGGCTGGTTATGCAACTGCTTGCTGGTTCAAAGATCATTGAAGTAGACAACAATGTCCGTGAAGATCGTGCCCTCTTAAACGGAGCACAGAAGCTTCTTGGCATCTTGATAGCTGTTGGAGAGGCAGTTGCCTATGTTCTTTCTGGGATGTATGGAAGTGTAGGCCAACTTGGAGTAGGGAATGCTATACTCATCATCGTTCAGCTATGCTTTGCTGGTATCATTGTGATTTGCTTAGATGAGCTTCTTCAAAAAGGATATGGCCTGGGTTCTGGAATTTCCCTATTCATTGCAACTAATATCTGTGAAAATATCATATGGAAGGCATTTAGTCCCACCACCATTAACAGTGGACGTGGTGCTGAATTTGAGGGTGCTGTTATTGCTCTATTCCATTTGTTGATAACTAGATCCGACAAAGTTCGGGCTCTACGGGAGGCATTTTACAGGCAGAATCTTCCTAACGTGACAAATCTTCTTGCTACTGTTTTGATCTTCTTAATTGTGATATACTTCCAAGGTTTCCGTGTAGTTTTGCCTGTAAGATCAAAGAATGCCCGTGGACAGCAGGGTTCATATCCTATTAAACTATTTTATACATCTAACATGCCCATTATTCTTCAGTCTGCTCTGGTTTCCAATCTGTACTTTATCTCTCAGCTGCTTCACCGAAAGTACAGTGGGAACTTCTTCGTGAACTTGTTGGGCAAATGGAAGGAGACTGAATATGGAGGTGGTCAGTCTATTCCTGTGGGTGGTATTGCATATTACATTACAGCACCATCTAGCTTAGCTGATATGGCGGCAAATCCTTTCCATGCATTGTTCTATTTGGTGTTCATGTTGTCAGCCTGTGCCTTGTTCTCTAAAACTTGGATTGAAGTCTCTGGATCATCTGCTAGAGATGTTGCCAAACAATTGAAGGAACAACAAATGGTGATGCCAGGGCACCGTGAGTCGAACTTGCAGAAGGAGCTAAATCGATATATCCCTACGGCAGCCGCATTTGGAGGGATATGCATTGGGGCACTGACCGTGTTAGCTGATTTCATGGGGGCAATTGGGTCAGGCACAGGGATTTTACTTGCAGTGACCATTATTTATCAGTACTTCGAGACATTCGAGAAGGAGAGAGCCAGCGAGCTTGGCTTCTTCGGTTTCTAA 1197 0.4411 MELGITPIVTSGLVMQLLAGSKIIEVDNNVREDRALLNGAQKLLGILIAVGEAVAYVLSGMYGSVGQLGVGNAILIIVQLCFAGIIVICLDELLQKGYGLGSGISLFIATNICENIIWKAFSPTTINSGRGAEFEGAVIALFHLLITRSDKVRALREAFYRQNLPNVTNLLATVLIFLIVIYFQGFRVVLPVRSKNARGQQGSYPIKLFYTSNMPIILQSALVSNLYFISQLLHRKYSGNFFVNLLGKWKETEYGGGQSIPVGGIAYYITAPSSLADMAANPFHALFYLVFMLSACALFSKTWIEVSGSSARDVAKQLKEQQMVMPGHRESNLQKELNRYIPTAAAFGGICIGALTVLADFMGAIGSGTGILLAVTIIYQYFETFEKERASELGFFGF 398
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele11g0614 398 Pfam SecY 1 381 IPR002208 GO:0015031|GO:0016020
Lele11g0614 398 TIGRFAM 3a0501s007: preprotein translocase, SecY subunit 1 389 IPR002208 GO:0015031|GO:0016020
Lele11g0614 398 PANTHER SECY/SEC61-ALPHA FAMILY MEMBER 1 392 IPR002208 GO:0015031|GO:0016020
Lele11g0614 398 SUPERFAMILY Preprotein translocase SecY subunit 1 388 IPR023201 -
Lele11g0614 398 FunFam Transport Sec61 subunit alpha isoform 2 1 396 - -
Lele11g0614 398 PIRSF SecY_Sec61alpha 1 393 IPR002208 GO:0015031|GO:0016020
Lele11g0614 398 Gene3D SecY subunit domain 1 397 IPR023201 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele11g0614 Lele-ChrLele11 5997582 6000093 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele11g0614 1 398 Miscellaneous Gene Families AT2G34250 92.965 0.0 751
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele11g0614 11 5997582 6000093 Lele11g0614 11 5997582 6000093 ECH
Lele09g0603 09 4604892 4607429 Lele11g0614 11 5997582 6000093 hybridization
Lele10g0551 10 4044881 4047615 Lele11g0614 11 5997582 6000093 hybridization