Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele06g1407 ATGTTCCAAAATACATACATCGAAGCAAACTCAGAAAATCCCATTGTTTGTAATAGCGGCGCATTGAAATCGTTTACAGGTTCTAAAACTCTACATCGTGATGATGATAGGATTTGCACGAGCAGCTGTTGCTTGAGCTACTCCATTAAGTCACTGATAAGTGGTTTTGGGGCTAATGCGACTGCGTATGAGATTGATCAAATAAGCAATGGGAAGCAGATTGAGAGGGAATTGATTGAATTGGGATGTCAACCAAGCGTACCTGCTGTGTTCATAGGCCAAAAGTTCATCGGTGGTGCTAACCAAATCATGAGCCTCCATGTTCGGAACGAGTTAGTGACTCTGCTCATGAACGCCAAAGCCATTTGGATTTGGAACAAAAAGTGA 387 0.4238 MFQNTYIEANSENPIVCNSGALKSFTGSKTLHRDDDRICTSSCCLSYSIKSLISGFGANATAYEIDQISNGKQIERELIELGCQPSVPAVFIGQKFIGGANQIMSLHVRNELVTLLMNAKAIWIWNKK 128
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele06g1407 128 Gene3D Glutaredoxin 3 125 - -
Lele06g1407 128 CDD GRX_GRXh_1_2_like 41 115 - -
Lele06g1407 128 Pfam Glutaredoxin 41 97 IPR002109 -
Lele06g1407 128 ProSiteProfiles Glutaredoxin domain profile. 23 123 - -
Lele06g1407 128 TIGRFAM GlrX-like_plant: glutaredoxin-like family 40 124 IPR011905 -
Lele06g1407 128 SUPERFAMILY Thioredoxin-like 40 123 IPR036249 -
Lele06g1407 128 PANTHER GLUTAREDOXIN 40 124 IPR011905 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele06g1407 Lele-ChrLele06 9068415 9069181 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele06g1407 42 124 Miscellaneous Gene Families AT4G15700 54.217 1.93e-31 106
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele06g1407 06 9068415 9069181 Lele07g1619 07 10017974 10018306 hybridization
Lele06g1407 06 9068415 9069181 Lele08g1406 08 9011131 9011451 hybridization