Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele06g1380 ATGCCGCGGCCGAGGGAGCCGGAATGCTTCATTGTTTCCTATATTCTGGTTTTCATGTGTTTGGCACAGATACAGTGCCATTTCCATGTTCTAGCCATGTTGGACCCTCTTGATTTCTTGGCTCTCCAATCGATTCGCAAGTCTCTCAAGGATATGCCGGGCTCGAATTTCTTTGACTCTTGGGATTTCACTGCTGACCCATGCAGTTTTGCCGGAGTTTACTGTGATTCCGACAAGGTTGTTGCCCTTAACCTCGGCGACCCCAGAGCTGGTTCTCCCGGTCTGACAGGTAGGCTCGACCCGGCCATCGGTAAGCTGTCTGCTCTTTCTGAGTTCACGGTTGTGCCTGGTAGAATCTACGGTTCTCTGCCTCAGTCATTCTCTAATTTGAAGAGTCTCAGATTCCTTGGCTTTAGCCGGAACTTCATTTCCGGCGAGATTCCGGAGAACTTGGGCAGGTTACGCAATCTCAGAACCCTCGATCTCAGCTACAATCAGCTCACTGGACGCATTCCTTCATCCATCGGAGCCATACCGGAGCTAAACAACTTGATCCTCTGCCACAACCACCTCTCCGGTTCAGTCCCCCCGTTTGCTTCACACATCCTAACTCGACTTGACCTGAAGCACAACTCTCTCACGGGCTCGCTCGCTCCCAATTCTCTCCCCCCTTCACTCCAATATCTCTCTCTGTCCTGGAATAATCTCACTGGCCCGGTGGATCGGCTCTTGAACCGGATGAACGAGTTGAACTACCTGGACCTTAGCTTGAACCGGTTCATTGGCATCATCCCGCCTCGCATATTCTCGCTCCCACTTACCAATCTTCAACTGGAAAGGAACCAATTCACCGGCCCTGTCCAACCGGTTAATCAAGTCACCATCCCAACCGTGGATCTTAGCCACAACGAGTTTTCGGGTCAAATATCACCCATGTTTTCGACCGTGGAGAATCTATACCTCAACAACAACCAGTTCACGGGTCGGGTTCCGAGCAACTTCGTGGACCGGCTATTGGCCGCTCGGATACAGATACTGTATTTGCAGCACAACTATCTGACCAACATTGAGATCAGTCCAACGGCTGAGATTCCTGTGAGCAGCTCATTGTGTCTTCAATACAACTGTATGGTCCCGCCCATACAGACGCCATGCCCCTTGAGGTCTGGGAAACAGATAACGAGGCCTACAGCACAATGCAACCAAGGGAGAGGGTAA 1218 0.5131 MPRPREPECFIVSYILVFMCLAQIQCHFHVLAMLDPLDFLALQSIRKSLKDMPGSNFFDSWDFTADPCSFAGVYCDSDKVVALNLGDPRAGSPGLTGRLDPAIGKLSALSEFTVVPGRIYGSLPQSFSNLKSLRFLGFSRNFISGEIPENLGRLRNLRTLDLSYNQLTGRIPSSIGAIPELNNLILCHNHLSGSVPPFASHILTRLDLKHNSLTGSLAPNSLPPSLQYLSLSWNNLTGPVDRLLNRMNELNYLDLSLNRFIGIIPPRIFSLPLTNLQLERNQFTGPVQPVNQVTIPTVDLSHNEFSGQISPMFSTVENLYLNNNQFTGRVPSNFVDRLLAARIQILYLQHNYLTNIEISPTAEIPVSSSLCLQYNCMVPPIQTPCPLRSGKQITRPTAQCNQGRG 405
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele06g1380 405 PANTHER LEUCINE-RICH REPEAT (LRR) FAMILY PROTEIN 16 402 - -
Lele06g1380 405 Pfam Leucine Rich Repeat 156 175 IPR001611 GO:0005515
Lele06g1380 405 Pfam Leucine Rich repeat 224 238 IPR001611 GO:0005515
Lele06g1380 405 FunFam Nuclear pore complex protein NUP107 37 197 - -
Lele06g1380 405 SUPERFAMILY L domain-like 47 383 - -
Lele06g1380 405 Gene3D Ribonuclease Inhibitor 201 383 IPR032675 -
Lele06g1380 405 Gene3D Ribonuclease Inhibitor 38 200 IPR032675 -
Lele06g1380 405 ProSiteProfiles Leucine-rich repeat profile. 156 178 IPR001611 GO:0005515
Lele06g1380 405 Pfam Leucine rich repeat N-terminal domain 38 76 IPR013210 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele06g1380 Lele-ChrLele06 8882953 8884170 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele06g1380 41 354 Receptor kinase-like Gene Family AT5G62230 34.049 1.23e-41 155
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele06g1380 06 8882953 8884170 Lele06g1380 06 8882953 8884170 ECH
Lele06g1380 06 8882953 8884170 Lele07g1587 07 9806952 9808169 hybridization
Lele06g1380 06 8882953 8884170 Lele08g1376 08 8818715 8821072 hybridization