Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele06g1369 ATGCTGCCGATGCAACCGCCGCCGCCGCCCTTGCTCATTTCTGATTCCTGCGCTAAGGACGCTATAATTTCCTGGTTTCGCAGCGAGTTTGCGGCTGCAAACGCCATCATCGACACTCTGTGTGGTCATTTAGCTCATTCGGACGCCTCTTCTGACTATGATTCTGTGTTCACCGCAATTCACCGTCGTCGACTTAACTGGATCCCGATACTGCAGATGCAGAAATATGATTCCATAGCTGATGTGACGTTGGAGCTCCGCAAAGTGGCTGAGAAGAAAACTGAGACTAAGGAAATCGGGGGAGGGGAAAGGAGGATTGAGGATTTGGGGAATCGCTTGGATGGAGAGAAGAAAATCGAAGAGAAAAGAACGGAGAATAAAGTGAATTCTGAAGGCGACGAATGTCATGAAGAGTATGATTCGCCTAACAGTGAAATTACTGATTCAGGATGTCAAGAAATGCAGGGAAGTTTGATGAACGTTAATATATGTTCAAAGCATGAAGAATGCGAAGGACGTTCTTCACAGATAACGTTGAGGAAAGGTTTCCAAGCGAAGGAGACAGTGAGGGGGCACATGGTGAATGTTGTGAAGGGATTGAAGCTATATGAGGACATTTTCACCGATCCCGAACTCAGCAAGCTCACTGATTTTGTCAATGAGCTTCATGCTGCTGGCCAGAATGGAGAACTCTCTGGAGAAACTTTTATACTATTTAACAAGCAAATGAAGGGAAACAAACGAGAGATGATTCAACTGGGCGTACCAATTTTTGGACAGATAAAGGAGGATGCAAACAGCAATATAGAGCCAATTCCATCTCTCCTCCAAAATGTCATTGATCACCTTATCCAATGGCGTCTGCTTCCCGAATACAGAAGGCCAGATGGCTGCATCATCAACTTTTTTGAAGAGGGGGAATATTCTCAGCCATTCCTGAAACCACCACACCTGGATCAACCTCTGTCCACTCTTCTTCTTTCTGAATCAACTATGGCTTTTGGGCGTACCCTTATGAGCGAAAATGACGGGAACTACAAGGGGCCACTCATGCTCTCATTGAAGAAAGGGTCTCTTCTAGTGATGAGAGGAAACAGTGCTGACATGGCGAGGCACGTCATGTGTCCATCCCCAAACCGAAGGGTCAGCATCACCTTCTTCAGAGTGAGGCCAGACTCCAATCAATGCCAATCACCAACTCCTTCTATGATGAATGCCATGACCTTCTGGAAACCTGGAATTTCTGGTCCATATGGGTCGCCAAGTGTACCTTCCAGTGGGGCCGAGGCAATGGGAATGATGCCCAAATGGGGAATTCTCCGAGCTCCAATGGTGATGGTAGCCCCTGTAAGCCCTCCAAAATTAGCCAGTGGTGGAGGAACTGGGGTGTTCTTGCCCTGGAATGTGCCATCCAGAAAACCTGCAAAGCATCTTCCACCACGCGCCCAACGACTTCTGGCATTACCTTCCTCAGCTGAATCGCACATATCAGACTCTTCTTCTGAACCCAGCATTAGTGCATGA 1524 0.4744 MLPMQPPPPPLLISDSCAKDAIISWFRSEFAAANAIIDTLCGHLAHSDASSDYDSVFTAIHRRRLNWIPILQMQKYDSIADVTLELRKVAEKKTETKEIGGGERRIEDLGNRLDGEKKIEEKRTENKVNSEGDECHEEYDSPNSEITDSGCQEMQGSLMNVNICSKHEECEGRSSQITLRKGFQAKETVRGHMVNVVKGLKLYEDIFTDPELSKLTDFVNELHAAGQNGELSGETFILFNKQMKGNKREMIQLGVPIFGQIKEDANSNIEPIPSLLQNVIDHLIQWRLLPEYRRPDGCIINFFEEGEYSQPFLKPPHLDQPLSTLLLSESTMAFGRTLMSENDGNYKGPLMLSLKKGSLLVMRGNSADMARHVMCPSPNRRVSITFFRVRPDSNQCQSPTPSMMNAMTFWKPGISGPYGSPSVPSSGAEAMGMMPKWGILRAPMVMVAPVSPPKLASGGGTGVFLPWNVPSRKPAKHLPPRAQRLLALPSSAESHISDSSSEPSISA 507
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele06g1369 507 MobiDBLite consensus disorder prediction 121 146 - -
Lele06g1369 507 MobiDBLite consensus disorder prediction 490 507 - -
Lele06g1369 507 PANTHER HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY PROTEIN-RELATED 18 494 IPR044842 GO:0003729|GO:0006402|GO:0032451
Lele06g1369 507 SUPERFAMILY Clavaminate synthase-like 189 390 - -
Lele06g1369 507 MobiDBLite consensus disorder prediction 469 507 - -
Lele06g1369 507 MobiDBLite consensus disorder prediction 121 143 - -
Lele06g1369 507 Gene3D - 182 398 IPR037151 -
Lele06g1369 507 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 294 391 IPR005123 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele06g1369 Lele-ChrLele06 8817712 8822202 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele06g1369 06 8817712 8822202 Lele06g1369 06 8817712 8822202 ECH
Lele06g1369 06 8817712 8822202 Lele07g1578 07 9754129 9758809 hybridization
Lele06g1369 06 8817712 8822202 Lele08g1367 08 8768024 8773016 hybridization