Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele08g1364 ATGGGGAAGATTCTCCGAGAAACCTCGAAGCCATCTTCCAATTCTTCATCCCCATCTTCGTCTTCGCCGCCTGCAACAACCTCATCGACATCGGTCACCGATACTATAAGGGGTTCTCATCAGTTCAAGATCACGGGTTATTCGTTGTCAAAAGGAATTGGGATTGGGAAATACGTAGCATCTGACACGTTTTCGGTCGGTGGGTATGAGTGGGCGATCTACTTTTATCCAGATGGGAAGAGCGTGGAAGACAATGCTACCTACGTATCGCTGTTTATCGCGCTTGCCAGCGAAGGAACAGACGTTAGGGCTCTTTTTGAGTTGACCCTTTTAGATCAGAGTGGGAAAGAGAGGCATAAGGTACATAGTCATTTTGAGAGAACGCTCGAAAATGGGCCGTACACCTTAAAATATCGTGGTAGCATGTGGGGTTACAAGCGGTTTTTTAAGAGAACAGGTCTTGAGACGTCAGACTACCTTAAAGATGATTGCCTGTGTGTTAACTGTAGCGTTGGTGTTGTGAGGTCACACACGGAGGGCCCCAAGATCTACTCCATAGCAATTCCACCTTCTAACATTGGACAGCAATTTGGACAGCTACTGGAACTTGGAAAAGGAAGTGATGTGAGTTTTGAAGTTAATGGAGAAGTTTTTGCTGCTCATAAATTGGTACTAGCAGCTCGTTCACCTGTATTCAGAGCCCAACTTTTTGGTCCTATGAAGGATCAAAATACTCAGTGTATAAAAGTTGAGGACATGGAGGCTCCAGTTTTTAAGGCATTACTCCATTTCATATACTGGGACGCACTGCCTGACCTGCAAGAGCTTACTGGCTTGAACTCAAAATGGGCAACCACATTGATGGCTCAGCATCTGCTGGCTGCTGCTGATCGGTATGGTTTAGAGAGGCTTAGACTGATGTGTGAAGCCAGCCTCTGTGAAGTCGTTGCAATAAACACTGTGGCTACAACTCTAGCTTTGGCTGAGCATCACCATTGTTTCCAGCTGAAAGCAGTCTGTCTCAAATTCATTGCAATGCCTGAAAATCTCAGAGCTGTGATGCAAACTGACGGTTTTGAGTACTTAAAGGAAAGTTGCCCGTCTGTTCTGACCGAGCTATTGGAGTACGTGGCTAGATTTACGGAGCATTCAGACTTCATGAGCAAGAATAGGAGGGAAGCAATTCTTGATGGCAGCGACATACATGGTCGACGGGTGAAGCAAAGACTATAG 1233 0.4582 MGKILRETSKPSSNSSSPSSSSPPATTSSTSVTDTIRGSHQFKITGYSLSKGIGIGKYVASDTFSVGGYEWAIYFYPDGKSVEDNATYVSLFIALASEGTDVRALFELTLLDQSGKERHKVHSHFERTLENGPYTLKYRGSMWGYKRFFKRTGLETSDYLKDDCLCVNCSVGVVRSHTEGPKIYSIAIPPSNIGQQFGQLLELGKGSDVSFEVNGEVFAAHKLVLAARSPVFRAQLFGPMKDQNTQCIKVEDMEAPVFKALLHFIYWDALPDLQELTGLNSKWATTLMAQHLLAAADRYGLERLRLMCEASLCEVVAINTVATTLALAEHHHCFQLKAVCLKFIAMPENLRAVMQTDGFEYLKESCPSVLTELLEYVARFTEHSDFMSKNRREAILDGSDIHGRRVKQRL 410
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele08g1364 410 ProSiteProfiles BTB domain profile. 207 266 IPR000210 GO:0005515
Lele08g1364 410 MobiDBLite consensus disorder prediction 1 33 - -
Lele08g1364 410 CDD BTB_POZ_BPM_plant 193 313 - -
Lele08g1364 410 Pfam BTB/POZ domain 198 314 IPR000210 GO:0005515
Lele08g1364 410 FunFam BTB-POZ and math domain 1 316 393 - -
Lele08g1364 410 Gene3D Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A 36 175 IPR008974 GO:0005515
Lele08g1364 410 SUPERFAMILY TRAF domain-like 35 173 - -
Lele08g1364 410 ProSiteProfiles MATH/TRAF domain profile. 37 171 IPR002083 GO:0005515
Lele08g1364 410 SMART math_3 42 154 IPR002083 GO:0005515
Lele08g1364 410 CDD MATH 38 171 IPR002083 GO:0005515
Lele08g1364 410 Pfam MATH domain 56 171 IPR002083 GO:0005515
Lele08g1364 410 Gene3D Potassium Channel Kv1.1; Chain A 183 310 IPR011333 -
Lele08g1364 410 SUPERFAMILY POZ domain 184 314 IPR011333 -
Lele08g1364 410 FunFam BTB-POZ and math domain 1 183 310 - -
Lele08g1364 410 Gene3D - 316 394 - -
Lele08g1364 410 MobiDBLite consensus disorder prediction 7 33 - -
Lele08g1364 410 CDD BACK_AtBPM-like 313 376 IPR034090 -
Lele08g1364 410 SMART BTB_4 207 316 IPR000210 GO:0005515
Lele08g1364 410 PANTHER BTB/POZ AND MATH DOMAIN-CONTAINING PROTEIN 1 26 374 IPR045005 GO:0016567
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele08g1364 Lele-ChrLele08 8744006 8748094 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele13g2019 13 27450005 27467618 Lele08g1364 08 8744006 8748094 CCT
Lele14g1952 14 25800923 25814845 Lele08g1364 08 8744006 8748094 CCT
Lele15g0387 15 2214330 2230490 Lele08g1364 08 8744006 8748094 CCT
Lele08g1364 08 8744006 8748094 Lele08g1364 08 8744006 8748094 ECH
Lele05g1514 05 9710722 9724345 Lele08g1364 08 8744006 8748094 hybridization
Lele06g1367 06 8789522 8798634 Lele08g1364 08 8744006 8748094 hybridization