Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele08g1344 ATGGAAGCTACTCGCTTCGGCTCTCATGTCTCCCATCCACGTAGCTCTCGAACCAAACCTAAGATATTTCGAGGACTTCGGATATTTTCTAGCTCATTGCAACTCTGGATAGCTAGAATGAATAGGCTGGTCAATTATCGCATATATTCGCTTGTGTGTCGCTTATCATATGTTGCTGAAGAAATTGTTCCACCAACTCAAAGTGATAGGGAAGAGATTCTTGCATCTCCTGATTCCAATAACTTCAGAAACCTAGACTTGAGACCCAAAAAGTATGAAAATAGGTTTCTTAATTTTGTCCGTTGGAGTTCTGTCCTGAACGGAATTGCGGAATCATTTTTCAAAAGTGAGATACGGAGGAGGTTATTTGTGACTGCTGTACTAATTGTACTCAGTCGTGTTGGCTATTTTGTTCCTCTACCTGGCTTTGATAGGAGGTTGATACCACAAGACTACCTGAGCTTTGTCTCAGGATCTGTTGATGAACTTGGTGACTACACCTCTGAGCTCAAACTTTCTCTTTTCCAGCTTGGAATCAGTCCTCAGATTATAGCATCCATTATTATGCAGGTTCTTTGTCATATGGGTCAAGCATGTGATGGTGACAACTCTTTTGTTGGTCAAGGTTCATCACTTATTGTATGTGTGGGGATATTGACGGGTTATATGGAAACATTACACAAAATGCTGACTCAGCTCTCAGTGAGTGCTATGAGTTGGTGGCCCTATGTCCTTGCAGTGTTGGGTCTATTTACAATTGTCACTATGTGGGCAGTTGTAGTCACTGAAGGTTGCAGGAAAGTGAAACTTCAATACTATGGATTCAAACTTGCTTCTGCTGCAAGAGAGCAATCCCCAATTACTGAAGTGGAGCCCTATATTCCTTTCAACATCAATCCGTCAGGAATGCAACCTATTCTTACCACCTCTTACCTCATGGCATTTCCAAGCATTCTTGCAGGTTTGCTCGGTTCCCGTTTCTGGGAGCATGTCAAGGAGATATTGAACCCCGATACATCTGCTGGTGCTGATCCTTGGGCCAACTTGCCCAAGGAAATTGCTGATTACTTGAATAAGATGGGTGCTAGGATACCTAACATAAAGCCTGGGAAGGCTACAATAGAATACCTTTCGAAAGTTCAGGCATCCACACGATTCTGGGGGGGACTATTGTTAAGTGTATTGGCAACCACATCAAGTATTCTTGATCATTATTTACGGCGTACTAATGCTGGATTTGCAATTGGGTTTACATCAGTTTTGATTATTGTTGGTTCCATTATTGAGCTTAGAAGATCGTATCAAGCCTATAATGTAATGCCAAGTTTAAGCAAGGCCCTGAGACGGAAACTCTTTGCTTTTCAAGCACACCAGAGTCTAGTTCTGGGGCGACGAAGTAGTCATCTAACAGTTTTAAAAGTGAGGTACGGTGACATGCAAGGTTACAGACAGCATAGCAATGTTGTGAAGAGAATTCCATCTTTGGTTTAG 1491 0.4219 MEATRFGSHVSHPRSSRTKPKIFRGLRIFSSSLQLWIARMNRLVNYRIYSLVCRLSYVAEEIVPPTQSDREEILASPDSNNFRNLDLRPKKYENRFLNFVRWSSVLNGIAESFFKSEIRRRLFVTAVLIVLSRVGYFVPLPGFDRRLIPQDYLSFVSGSVDELGDYTSELKLSLFQLGISPQIIASIIMQVLCHMGQACDGDNSFVGQGSSLIVCVGILTGYMETLHKMLTQLSVSAMSWWPYVLAVLGLFTIVTMWAVVVTEGCRKVKLQYYGFKLASAAREQSPITEVEPYIPFNINPSGMQPILTTSYLMAFPSILAGLLGSRFWEHVKEILNPDTSAGADPWANLPKEIADYLNKMGARIPNIKPGKATIEYLSKVQASTRFWGGLLLSVLATTSSILDHYLRRTNAGFAIGFTSVLIIVGSIIELRRSYQAYNVMPSLSKALRRKLFAFQAHQSLVLGRRSSHLTVLKVRYGDMQGYRQHSNVVKRIPSLV 496
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele08g1344 496 Pfam SecY 206 430 IPR002208 GO:0015031|GO:0016020
Lele08g1344 496 PRINTS Preprotein translocase SecY subunit signature 122 140 - -
Lele08g1344 496 PRINTS Preprotein translocase SecY subunit signature 416 434 - -
Lele08g1344 496 PRINTS Preprotein translocase SecY subunit signature 172 192 - -
Lele08g1344 496 PANTHER SECY/SEC61-ALPHA FAMILY MEMBER 348 440 IPR002208 GO:0015031|GO:0016020
Lele08g1344 496 SUPERFAMILY Preprotein translocase SecY subunit 102 437 IPR023201 -
Lele08g1344 496 Gene3D SecY subunit domain 202 442 IPR023201 -
Lele08g1344 496 Gene3D SecY subunit domain 105 200 IPR023201 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele08g1344 Lele-ChrLele08 8586930 8593034 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele08g1344 61 449 Miscellaneous Gene Families AT2G31530 53.138 9.38e-151 441
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele08g1344 08 8586930 8593034 Lele08g1344 08 8586930 8593034 ECH
Lele05g1493 05 9563809 9569984 Lele08g1344 08 8586930 8593034 hybridization
Lele06g1349 06 8634238 8643938 Lele08g1344 08 8586930 8593034 hybridization