Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele05g1493 ATGGAAGCTACTCGCTTCAGCTCTCATATCTTCCATCCACGTAGCTCTCGTACTAAACCTAAGATATTTCGAGGCAGACAAGCAGAACAAATCCAATTTTACTCTATAAAGTACCATAAAACTGGGGTTTCTGGATTTGAAAGAAGGAAATCCCTATTGTTGAACGGATCGTTGTTTGATGGAGTAAATCGGAAGCATTATGTTAACGTCTCTGATAAGCGTCGAAGTGACTATTTGCATGTGGAAGGTCCAAATATTCAGCATTCAAGTCAGGAAATTGTTCCACCAACTCAAAGTGATGGGGCAGAGATTCTTGCATCTCCTGATCCCAATAACTTCAGAAACCTAGACTTGAGACCCAAAAAGTATAAAAATAGGTTTCTTAATTTTGTCCGCTTGAGTTCTGTCCTGAATGGAATTGCTGAATCATTTTTCAAAAGTGAGATACGGAGGAGGTTATTTGTGACTGCTGTACTAATTGTACTCAGTCGTGTTGGCTATTTTGTTCCTCTACCTGGATTTGATAGGAGGTTGATACCACAAGATTACCTGAGCTTTGTCTCAGGATCTGTTGATGAACTTGGTGACTACTCCTCTGAGCTCAAACTTTCTCTTTTCCAGCTTGGAATCAGTCCTCAGATTATAGCATCCATTATTATGCAGGTTCTTTGTCATGTTGTTCCTTCTCTAGTGAAACTGCGAAAGGAAGGTCTAGATGGACATGAGAAGATAAAGAGTTATATATGGTGGATGTCACTTGGCTTTGCAATTTTGGAAGCTCTAATACTTGCTTGCTACTCACTTCCATATTCAATTTATGCTGCCAATCAAAGGGTCAAGCATGTGATGGTGACAACTCTTTTGTTGGTGTGTGGTGCAATGACTATTACATGGATATGTGATACCATCTCAGAATCTGGCTTCGGTCAAGGTTCATCACTTATTATATGTGTGGGGATATTGACTGGTTATATGGAGACATTACACAAAATGCTGACTCAGCTCTCAGTGAGTGCTGTGAGTTGGTGGCCCTACGTACTTGCAGTGTTGGGTCTATTTACAATTGTCACTATGTGGGCAGTTGTAGTTACTGAAGGTTGCAGGAAAGTGAAACTTCAGTACTATGGCTTCAAACTTGCTTCTGCTGCAAGAGAGCAATCCCCAATTACTGAAGTGGAGCCCTATATTCCTTTCAACATCAATCCGTCAGGAATGCAACCTATTCTTACCACCACTTATCTCTTGGCATTTCCAAGTATTCTTGCAGGTTTGCTCGGTTCGCGCTTCTGGGAGCATGTCAAGGAGATATTGAACCCCGATACATCTGCTGGTGCTGAGCCTTGGGTTTACTATTCCATCTATGCTTTCTTTGTCTTCTTATTCAATATATTTGATATTGCCAACTTGCCCAAGGAAATTGCTGATTACTTGAATAAGATGGGTGCCAGGATACCTAATATAAAGCCTGGGAAAGCTACAATAGAATACCTTTCGAAAGTTCAGGCATCCACACGATTCTGGGGGGGGCTATTGTTAAGTGTACTGGCAACCACATCAAGTATCCTCGATCATTATTTACGGCGTACGAATGCCGGATTTGCAATTGGGTTTACATCAGTTTTGATTATTGTTGGTTCCATTATTGAGCTTAGAAGATCTTATCAAGCCTATAATGTAATGCCAGCTTTAAGCAAGGCCCTGAGACGGTATGGCCTATAG 1719 0.4113 MEATRFSSHIFHPRSSRTKPKIFRGRQAEQIQFYSIKYHKTGVSGFERRKSLLLNGSLFDGVNRKHYVNVSDKRRSDYLHVEGPNIQHSSQEIVPPTQSDGAEILASPDPNNFRNLDLRPKKYKNRFLNFVRLSSVLNGIAESFFKSEIRRRLFVTAVLIVLSRVGYFVPLPGFDRRLIPQDYLSFVSGSVDELGDYSSELKLSLFQLGISPQIIASIIMQVLCHVVPSLVKLRKEGLDGHEKIKSYIWWMSLGFAILEALILACYSLPYSIYAANQRVKHVMVTTLLLVCGAMTITWICDTISESGFGQGSSLIICVGILTGYMETLHKMLTQLSVSAVSWWPYVLAVLGLFTIVTMWAVVVTEGCRKVKLQYYGFKLASAAREQSPITEVEPYIPFNINPSGMQPILTTTYLLAFPSILAGLLGSRFWEHVKEILNPDTSAGAEPWVYYSIYAFFVFLFNIFDIANLPKEIADYLNKMGARIPNIKPGKATIEYLSKVQASTRFWGGLLLSVLATTSSILDHYLRRTNAGFAIGFTSVLIIVGSIIELRRSYQAYNVMPALSKALRRYGL 572
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele05g1493 572 Pfam SecY 204 550 IPR002208 GO:0015031|GO:0016020
Lele05g1493 572 PRINTS Preprotein translocase SecY subunit signature 305 328 - -
Lele05g1493 572 PRINTS Preprotein translocase SecY subunit signature 279 304 - -
Lele05g1493 572 PRINTS Preprotein translocase SecY subunit signature 153 171 - -
Lele05g1493 572 PRINTS Preprotein translocase SecY subunit signature 403 422 - -
Lele05g1493 572 PRINTS Preprotein translocase SecY subunit signature 448 470 - -
Lele05g1493 572 PRINTS Preprotein translocase SecY subunit signature 244 267 - -
Lele05g1493 572 PRINTS Preprotein translocase SecY subunit signature 203 223 - -
Lele05g1493 572 PRINTS Preprotein translocase SecY subunit signature 536 554 - -
Lele05g1493 572 SUPERFAMILY Preprotein translocase SecY subunit 133 557 IPR023201 -
Lele05g1493 572 FunFam Preprotein translocase subunit SCY2, chloroplastic 137 562 - -
Lele05g1493 572 PANTHER SECY/SEC61-ALPHA FAMILY MEMBER 143 560 IPR002208 GO:0015031|GO:0016020
Lele05g1493 572 Gene3D SecY subunit domain 136 562 IPR023201 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele05g1493 Lele-ChrLele05 9563809 9569984 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele05g1493 62 572 Miscellaneous Gene Families AT2G31530 74.808 0.0 799
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele05g1493 05 9563809 9569984 Lele05g1493 05 9563809 9569984 ECH
Lele05g1493 05 9563809 9569984 Lele07g1554 07 9577754 9584319 hybridization
Lele05g1493 05 9563809 9569984 Lele08g1344 08 8586930 8593034 hybridization